Gene Shel_16850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16850 
Symbol 
ID8395575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1892821 
End bp1893549 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content63% 
IMG OID644986439 
Product4Fe-4S protein 
Protein accessionYP_003144053 
Protein GI257064381 
COG category 
COG ID 
TIGRFAM ID[TIGR00402] ferredoxin-type protein NapF 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.459268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.811902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAT CTGATGCCGG TATGGTGCGC GAGGATGAGG TCCACGGCTC TGCGGGCGTC 
GACCGCCGCA CGTTGCTCAT CGGAGCGGGT TCCACTGCCG TATTGCTGGG GGTCGGCGGC
CTGCGCTACG TCGGTTCCGT TCCCCAGGTC CGTCCGCCTG GAGGACAGGA CGAAGATCAC
CTTATCGCAG CATGCATACG TTGCAACCGC TGCGTCGAGG CATGCCCCAT GCAAGTCATC
GTTCCGTCGA GGATCGAGTA CGGCATCCTG GGCATGCGTA CACCCCGCCT GGAGTTCTCC
GAGAACCCTC CGGGCGACAT GGACGGGATC GCGTTTTGCG ATTTCTGCGC CGAGGCGAAC
GACGGCGTTC CGCTCTGCGT GCAGGTATGC CCTACGGAAG CCCTCAAAGT GCCCGAAGGC
GAAGTGGTCG AAGACACGAT TCTCGGCGTC GCCGAGCTCG ACAAGGACCT CTGCATGGCG
TACCGAAGCG GCTTCTGCGC CTTCTGCCAT GACGCGTGCA TCGAAGCGCG CGGCGAGGAA
GCAGCTGCAA TCTATTATGT CGGTTCGGAA GACGGCACCA GCATGCTGCC CGTCGTGGAT
GCCGAGAGAT GCAACGGGTG CGGAGCCTGC GAATCCGTAT GCGTGTCGAT TCAAGACGGA
TCGGTGGTCA ATGCGAAGGA GCGCGCCATC GTCGTCAGGT CTCTGGAGTA TCTGGAGGTG
GCGGAATGA
 
Protein sequence
MAASDAGMVR EDEVHGSAGV DRRTLLIGAG STAVLLGVGG LRYVGSVPQV RPPGGQDEDH 
LIAACIRCNR CVEACPMQVI VPSRIEYGIL GMRTPRLEFS ENPPGDMDGI AFCDFCAEAN
DGVPLCVQVC PTEALKVPEG EVVEDTILGV AELDKDLCMA YRSGFCAFCH DACIEARGEE
AAAIYYVGSE DGTSMLPVVD AERCNGCGAC ESVCVSIQDG SVVNAKERAI VVRSLEYLEV
AE