| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_16630 |
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| Symbol | |
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| ID | 8395553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1870845 |
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| End bp | 1872647 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644986417 |
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| Product | succinate dehydrogenase/fumarate reductase flavoprotein subunit |
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| Protein accession | YP_003144031 |
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| Protein GI | 257064359 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.770903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.816981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGA ACACCAAGAA CCTGTCCCGT CGCGGATTCC TGTCCGGCGC CGCCCTCGCA
GGCGTAGCCG CGGCCGGCTT GGCCGCATGC TCGCCCAGCG CATCCGGCAC GGGCGAAAGC
GCAGCCGCCG CCGACGGCGA AACCGCTGCA GCAGCAACCG GCGAAGGCAC CCTCGGATAC
GACGGCACCG GCAACATGCC CTGGCTCGGC GAGATGCCCG TCATCGACGA TGCTTCCGTT
GAGGAAGAGC TCGACGCCGA CGTTCTGGTC ATCGGTCTGG GCGCAGCCGG CGTGCCTGCA
TGCCGCGCTG CTGCGGAAGC CGGCGCCAAG GTCGTGGCCT TCGAAGCCTC TTCCCATCTG
AACAGCGTCG CCAGCGACAT GGCCATCCTC GGCGGCGAGA CCCAGGCCAT GTGGGGCCGC
GGCGAAGGCT ACATCGACCG CTGGACCATC ATCAACGAGC ACATGAAGGA ATGCAGCCAC
CACGGCAACT ACGCCATCAT GAACCGCTGG GCCGACGTGT CCGGCGCGGC TCTGGACTGG
TTCGTGGCCG GCAGCCCCAG CCTGTACTTC GTGAAGGATG ACGCCTACGA GGAGATTCCC
GAAGAGGGCC AGGCCAACTA CATGTTCCCC TACTGCTACC CCGTGCCCGA CACCTATGAC
TGGACCAAAG AGGAGATGCC CTGCTATCCC ACGTCCGTCG GTTTCAGTAG CCTGGGTACC
GTCATGAAGG ACAACCTGCA GATCGCCATC GACGCCGGCG CCGACATCCG CTACGACACC
CGCGGCATCG AGCTGATCAC CGACGACTCC GGAGCCGTCA TCGGCGCATA CGGCCAGGCG
AAGGGATCCG AGGGCTACAT CAAGGTGAAC GCGCCCGCCG TCATCCTGGC AACCGGCGAC
TACCTGGCCA ACGAGGACAT GATGAAGTAC TTCGCCCCCG AGTGCATCGA GAACCAGATC
CCCATTCTGA GCCTTGATAT GGACGCCGAC GGCAACTACA CCAACGTGGG CGACGGCCAC
AAGATGGGCG CCTGGGTCGG CGGCGCCATC GAGCAGTGGC ACGCACCCAT CATCCACCAC
ATGGGCGGCG GTGCAGGCCC CGACGGCCGC GGCGTCATCG GCAACAACGG CTACCTGTGG
CTGAACCTGC GCGGCGAGCG CTTCATGAAC GAGGACCTGC CCGGCCAGCA GCTGGAGAAC
CAGGTGGAGC TGCAGCCGCA GCGCAAGGCC TACCAGTTCT TCGATTCGAA GTGGCCCGAG
CAGCTGGCCT ACTTCCCCAT GGCCCACGGC GTCGCCTGCA TCTACCGTGA GGAAGCCCTG
CCCGATTACA CCGCATCCGG CCTGCGCATC AACGTCCGCA CCAAGGAGGA CATCGACGCA
GCCATCGCCG ACGGCCGCTG CCTGACCGCA GACACCGTCG AGGACCTGCT CGCCCAGATC
GAAGGCATGG ACGTGGAAAC CGCCAAGGCC TCCATCGAGC GCTACAACGA GCTGTGCAAC
GCCGGCCAGG ACTCCGACTT CGGCAAGGCC AGCCAGCGCC TGTTCGCCCT GGAGAACGGC
CCGTTCTACG CCGCCGAATG CGGCTGCGCC CTGACCCTGG GCAACCTGGG CGGCTTCGAA
TCCGACGCCG ACTGCCACGT GTACAACACC GACCGCGAGC GCATCCCCGG CCTGTACGTG
TGCGGCGCTC CGCAGGGCGG CCGCTTCAAC GTCCAGTATC CCATCTCGCT CAAGGGCCTG
AGCTGCGGTA TGTGCATGGT CTTCGGCATG ATCGCAGGCC AGAACGCTGC CGCCTTGGCA
TAA
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| Protein sequence | MSKNTKNLSR RGFLSGAALA GVAAAGLAAC SPSASGTGES AAAADGETAA AATGEGTLGY
DGTGNMPWLG EMPVIDDASV EEELDADVLV IGLGAAGVPA CRAAAEAGAK VVAFEASSHL
NSVASDMAIL GGETQAMWGR GEGYIDRWTI INEHMKECSH HGNYAIMNRW ADVSGAALDW
FVAGSPSLYF VKDDAYEEIP EEGQANYMFP YCYPVPDTYD WTKEEMPCYP TSVGFSSLGT
VMKDNLQIAI DAGADIRYDT RGIELITDDS GAVIGAYGQA KGSEGYIKVN APAVILATGD
YLANEDMMKY FAPECIENQI PILSLDMDAD GNYTNVGDGH KMGAWVGGAI EQWHAPIIHH
MGGGAGPDGR GVIGNNGYLW LNLRGERFMN EDLPGQQLEN QVELQPQRKA YQFFDSKWPE
QLAYFPMAHG VACIYREEAL PDYTASGLRI NVRTKEDIDA AIADGRCLTA DTVEDLLAQI
EGMDVETAKA SIERYNELCN AGQDSDFGKA SQRLFALENG PFYAAECGCA LTLGNLGGFE
SDADCHVYNT DRERIPGLYV CGAPQGGRFN VQYPISLKGL SCGMCMVFGM IAGQNAAALA
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