Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_16440 |
Symbol | |
ID | 8395534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1847719 |
End bp | 1848615 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644986398 |
Product | proline-specific peptidase |
Protein accession | YP_003144012 |
Protein GI | 257064340 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01250] proline-specific peptidases, Bacillus coagulans-type subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.412913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.700734 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGA TGAAGTCGGG ATACGTGGAT TACAAGGGCT TCAAAACCTA CTACGAGATC TATGGCGAGC GCAAGGACAA CGGCAAGAAA CCCCTGCTCA TCCTGCACGG TGGCCCAGGC GACACGCATC TGTACCTGCT CAACTACCGC GACATGGCAG ATTTGTACGA CCGCCAGATC ATCTTCTACG ACCAGATCGG CTGCGGCAAG TCCAACATCC CGCACCAGGA GGACGACTTC TATAACTACG ACCTGTGGAT CGACGAATAT TACACCGTGA TCGACGCTCT GGGTCTGGAC GACTTCCATC TGTTCGGCAA CAGCTGGGGC GGCATGCTGG CCATGATGTG CATGATCAAG GACGACCGTG GCGTGGCCTC CATGGTTGTC AACGGCTCGC CTGTCGACAA CCACACCTGG CTGTCCGAGG CGAATCGCCT GATCATGTAC CTGCCCGAGG AGATGCAGCA GGCCATCGCC GACGCCGAGG CCGAAGGCGG CCTGTACAAC ACGCCTGAGC GCGAAGCCGC CTACATGGAG TACTACCGCC GCCACGTGGT GGGCTGCGAC CCCTGGCCCG ACTATGTTCA GGAGGCCTTC AAACCTGAGA ACGTGGGCGA ATGCTTCGGC GTCATGCAGG GTTCCAGCGA GTTCGTCATG ACCGGCAAGA TGAAGGACTT CTACATCAAG GACCAGGTCA AAGACATCAA GGTGCCCACC ATGCTGCTGT CCGGCACCAA CGACGAGGCC ACCCCGTACC TGATCAAGGA ATGCTATGAC GCCATGCCCG CAGGCACCGA GTGGGTGCTG GTCCAGGGCG CGGCGCACAT CGGCAACGCC ACCCACGCCA AGGAATACTT CGAAGCGGTG GAGAACTTCA TCTCCCGCCA CGAGTAA
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Protein sequence | MAEMKSGYVD YKGFKTYYEI YGERKDNGKK PLLILHGGPG DTHLYLLNYR DMADLYDRQI IFYDQIGCGK SNIPHQEDDF YNYDLWIDEY YTVIDALGLD DFHLFGNSWG GMLAMMCMIK DDRGVASMVV NGSPVDNHTW LSEANRLIMY LPEEMQQAIA DAEAEGGLYN TPEREAAYME YYRRHVVGCD PWPDYVQEAF KPENVGECFG VMQGSSEFVM TGKMKDFYIK DQVKDIKVPT MLLSGTNDEA TPYLIKECYD AMPAGTEWVL VQGAAHIGNA THAKEYFEAV ENFISRHE
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