Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_16270 |
Symbol | |
ID | 8395517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1828436 |
End bp | 1828906 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644986381 |
Product | SSU ribosomal protein S7P |
Protein accession | YP_003143995 |
Protein GI | 257064323 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0049] Ribosomal protein S7 |
TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000189839 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000425179 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGCGTC GTGCAGCAGC AACCCGCCGC GAAGTGCAGC CGGATGCAAG GTACAACAAT CGTTTGGTCA CGCAGCTGAT CAATAAGGTC CTCCTGGACG GCAAGAAGTC CGTCGCAGAA GGCATTGTCT ATGGTGCGTT TGACATCGTC GCCGAAAAGA CCGGCCAGGA TCCGCTGACC GTCTTCAAGA AGGCCATGGA CAACGTTCGC CCCACGCTGG AGGTCAAGCC CAAGCGTATC GGTGGCGCTA CCTATCAGGT CCCCATGGAG GTCGCACCCC GTCGTGCCAC CACCCTGGCC ATCCGCTGGC TCGTCGACTT CTCCCGCAAG CGCAAGGAGC ACACCATGGC TCAGCGCCTT GCTCAGGAGA TCATCGACGC CTCTGAGAAC ACCGGTGCTT CCGTGAAGCG TCGCGAGGAT CTCTACAAGA TGGCCGAATC CAACCGTGCG TTCTCGCACT ATCGTTTCTA G
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Protein sequence | MPRRAAATRR EVQPDARYNN RLVTQLINKV LLDGKKSVAE GIVYGAFDIV AEKTGQDPLT VFKKAMDNVR PTLEVKPKRI GGATYQVPME VAPRRATTLA IRWLVDFSRK RKEHTMAQRL AQEIIDASEN TGASVKRRED LYKMAESNRA FSHYRF
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