Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_15290 |
Symbol | |
ID | 8395419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1750914 |
End bp | 1752530 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644986283 |
Product | ATP phosphoribosyltransferase |
Protein accession | YP_003143898 |
Protein GI | 257064226 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
TIGRFAM ID | [TIGR00070] ATP phosphoribosyltransferase [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0483798 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATACCGG TTACGCCAAG GGGGTTCAGG GATATTCTTC CCGAAGAGGC CCTGAAACGT GAAGAAATCA CCGATAAAGT CAAGGCGTGT TTTTCCGCCC ACGGTTACCT GCCGGTGGAA ACGCCGCTTT TGGAGGACCG CCATTCCATG GAGCGTGCCA CGGCGGTCGA GGACACGCCG TTTCAGATGT TCGATGACGG CGGCCGCCTG CTTATCCTTC GATCTGACCT GACGTTGCCC ATCGCGCGTC TGGTCGCCAC GCGCATGCAT GCCGACGAAA GCCCGGTGCG CCTGCGCTAC GCCGCGCCAA TCGTGCGTGA CACCACGGTG TTCATGGGGA AGTCGCGCCA GGTAACCCAG CTGGGTATCG AGCTTATCGG CCAGTCCGGC AAGAAAGCCG ATGTCGAGGT GCTTTCGCTA CTTGCTGAAT CGTTGAATGC CGCCGGCCTT GCCGGGTGGC GCATCGTCTG CGGCGATGTG AAGTTGGCCC GTGCGGCGCT GGATGCAGCT GGAATATATG GCGAGGACCG CACCGAGGTG CTTCGATTCA TCCACCGTTC CGACCTTGTC GGTCTGGATG TTTTCCTGGA GACGTTGGGC ATTTCCGAAA ACGCCCGTCG CGCCGTGTCG CAGCTTATGC GTGTGAGCGG CGACGCTGCG GCGCTGGATG AGGCTACGGC CATTTTGGAA TCCATCGGGG CAGACACCAC AGGCATCGAG GAGCTGCAGG TTGGCTTCGA TGCGGCTCGG GAACTCGGGT TCTCCGATGC GCTGTCGATG GACCTGTCCG TTTTGAACTC GTTCGACTAC TACACCGGAT TGGTGTTCGA GGCCCATGCG CCGGGGCTTT CCGCTCCGCT GGCATCTGGC GGACGCTACG ACGGTGTGCT TGCCCAATGG GGCGTCGACG CTCCTGCGGC CGGCTTCTCC ATATCGCTTG ACGGACTGGA AGAAGCCATC GGAGCATGTG TCGAGGACCG TCCGCTGCGC ATCGCGGTTC CTAAGGGTTC GCTGTTCGAG GAGTCCGTCA ACGTGCTGGA ATCCGTTGGC TTCGACGTGT CGGAGCTGCG CAACCCAGGC CGCCATCTAA TCATCCGCAC CGACGATGTG GAATACATCA TCGTGCGAGC CAGCGACGCC CCTGCCTTTG TAGCTACGGG CGGCGCCGAC TGCGGCATAT GCGGCCGCGA CTCGCTCATC GAGGCGAACC TCGACGTTGT GCAGCTGGTT GATCTGGGCT ACGGCACCTG CCGGTTCGTG GTCGCCGAGC CTGCCGAAGC CAAGGGCGCC GCTGATGCGG CCTACGCCCG CCGTGGCACG GTTCGCGTGG CTACGAAATA CCCCCGCATC ACCCAGAGGT ACTACGACCG CATAGGCAAG CAGGTGGATA TTATCACGCT GCACGGCAAC ATCGAGCTGG GCCCGGTGGT CGGGCTTTCC GACCGCATTG TGGACATCAC GGCCACGGGC ACCACGCTGC GTGAAAACAA CCTGGTCATC GTCGACGACG TCATGGAGTG TTCGGCCAGG TTCTTCGCCA ACCCGGTCCG CGTCCGTTGC GATGCGCGCA TCCGCGAGCT TGCTCGTAAG CTCGCTGCTT TGGAAGGAGC TGAATAA
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Protein sequence | MIPVTPRGFR DILPEEALKR EEITDKVKAC FSAHGYLPVE TPLLEDRHSM ERATAVEDTP FQMFDDGGRL LILRSDLTLP IARLVATRMH ADESPVRLRY AAPIVRDTTV FMGKSRQVTQ LGIELIGQSG KKADVEVLSL LAESLNAAGL AGWRIVCGDV KLARAALDAA GIYGEDRTEV LRFIHRSDLV GLDVFLETLG ISENARRAVS QLMRVSGDAA ALDEATAILE SIGADTTGIE ELQVGFDAAR ELGFSDALSM DLSVLNSFDY YTGLVFEAHA PGLSAPLASG GRYDGVLAQW GVDAPAAGFS ISLDGLEEAI GACVEDRPLR IAVPKGSLFE ESVNVLESVG FDVSELRNPG RHLIIRTDDV EYIIVRASDA PAFVATGGAD CGICGRDSLI EANLDVVQLV DLGYGTCRFV VAEPAEAKGA ADAAYARRGT VRVATKYPRI TQRYYDRIGK QVDIITLHGN IELGPVVGLS DRIVDITATG TTLRENNLVI VDDVMECSAR FFANPVRVRC DARIRELARK LAALEGAE
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