Gene Shel_15220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_15220 
Symbol 
ID8395412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1745293 
End bp1745604 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content58% 
IMG OID644986276 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_003143891 
Protein GI257064219 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00195826 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.13338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATAA AATACGACGA CCGCGGATTG GTGCCGGCCA TCGTGCAACA GTACGACACG 
GGCGAGGTGC TCATGATGGC GTGGATGAAC GCCGAATCGC TGGAGCTTAC GCGTAAGACG
GGCACCACCT GGTTCTGGTC GCGTTCACGT CAGGAATTGT GGAACAAGGG CGCCACCAGC
GGAAACATGC AGCAGGTCAA AAGCATCGCA ATGGATTGCG ACGGTGATAC GCTGCTGGTG
CAGGTGGATT CGCCGGGCCC GGCATGCCAT ACCGGCAACC GAACCTGCTT CTTCACGGAT
ATCACGTCCT AG
 
Protein sequence
MDIKYDDRGL VPAIVQQYDT GEVLMMAWMN AESLELTRKT GTTWFWSRSR QELWNKGATS 
GNMQQVKSIA MDCDGDTLLV QVDSPGPACH TGNRTCFFTD ITS