Gene Shel_15140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_15140 
Symbol 
ID8395404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1738709 
End bp1739083 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content60% 
IMG OID644986268 
ProductDesulfoferrodoxin 
Protein accessionYP_003143883 
Protein GI257064211 
COG category[C] Energy production and conversion 
COG ID[COG2033] Desulfoferrodoxin 
TIGRFAM ID[TIGR00320] desulfoferrodoxin
[TIGR00332] desulfoferrodoxin ferrous iron-binding domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.961008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.204633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGTCA AATTCTTGAA ATGCGAAAAG TGCGGTTCCG TCGTCATCAA CCTGTGGCCC 
GGTGAGGAAG GCGTCTGCGA AGGCGGCCCG ACCGAGCTTG TCGCCGGTTC TGTGGATGCC
GCCCGCGAGA AGCACATTCC CGTCGTGACC GTCGACGGCC AGAAGGTTCA CGTCGAGGTG
GGCGAAGTTC CTCATCCCAT GACCGAGCCC CATCTGATCG CCCGCATCGT CCTGGTCACC
AAGAAGGGCT ACCAGGTTGC CGAGCTTACG CCCGAAGATG CCCCCGTGGC CGACTTCATG
ATGGTCGAGG GCGACGAGGC CGTTAAGGTG TACGAGTATT GCAACCTTCA TGGGCTGTGG
GTGAAGGAGC TCTAG
 
Protein sequence
MDVKFLKCEK CGSVVINLWP GEEGVCEGGP TELVAGSVDA AREKHIPVVT VDGQKVHVEV 
GEVPHPMTEP HLIARIVLVT KKGYQVAELT PEDAPVADFM MVEGDEAVKV YEYCNLHGLW
VKEL