| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_14740 |
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| Symbol | |
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| ID | 8395364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1691396 |
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| End bp | 1693168 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644986228 |
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| Product | CTP:phosphocholine cytidylyltransferase |
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| Protein accession | YP_003143843 |
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| Protein GI | 257064171 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4750] CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000102014 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCACAC GAAACGAATT CGAGACCCTC TGCGCAATCC GCCAGAACCC TGGCGCCACG
CAACGCGAAC TCGCCGACGC ATTGGGCGTG TCCCTCGGAA CCGTCAACAA CGTGCACCGC
AGCCTCACGA AAGCCAAGCT CATCGAAGAG GGCCGCATCA CGGCGCGCGG TCTGAAGGAG
CTGCGTCCTT ACAAGGTCGA AAACGCGGTC ATCATGGCGG CCGGCCTCTC CTCCCGATTC
GCGCCCATCT CCTACGAGCG CCCCAAAGGC CTGCTGAAGG TCCGCGGGGA GGTGCTGATC
GAGCGCCAGA TCGAGCAGCT CATGGAAGCT GGCGTGAACG AAATCGTCGT GGTGGTCGGC
TACAAGTGCG AGCTCTTCTT CTATCTTGAA GAAAAGTACG GCGTGCAGAT CGTCGTGAAC
CACGAGTACG CGTCCAAGAA CAACCACTCC ACCCTGATGC GCGTCCGCGA GATGCTAGGC
AACACCTACA TCTGCTCCTC GGACGACTAT TTCACCACCA ACCCCTTCGA GCAGTACGTG
TGGAAGGCCT ACTACTCCGC GGAGTTCTCC GAGGGCCCCA CCCGCGAATG GTGCATGGAG
ACCGATCGCA AGGGCCGCAT CGAGAAAGTG ACCGTCGGTG GCGAAAACGC CTGGTACATG
ACGGGCCATG CCTATTTCGA CAAGGCGTTT TCCGACCGTT TCGTCGAGAT TCTGGAAGCC
GAGTACGACG ACCCCCGAAC GGCCGACAAG CTGTGGGAAG AGCTCTACAT CGAGCACATC
GACGAGTTCG ACATGGAGAT TAAGGAATAC GAACCCGACG TCATCTTCGA GTTCGATTCC
CTGGACGAGC TGCGCGACTT CGACCCGCTG TTCCTGGAGA ACGTCGACTC CAGCATTTTC
GACAACATCG TGGCGGTGCT CGGTTGCGAC AAATCGGAAA TCCGGGACGT GTACCCGCTC
AAGCAGGGCC TGACCAACCT CTCCTGCCAC TTCACCACTG ACGACGGCGA ATACGTGTAC
CGCCACCCCG GCGTGGGCAC CGAGCAGATG ATCGACCGCA GCGCCGAGGT TCAGGCGCTC
AACCTGGCGA AATCAATCGG CATCGACAAG ACCTTCGTGT TCGAGAACGC CAAGACCGGA
TGGAAGATCT CCAAGTTCAT CAAGAACTGC CGTGAACTGG ACCCACGCGA CGACGCGCAG
CTGGCCGAAG CCATGCAGGT GGCCCACAAG CTGCATGGGC AGAACGTGTC GCTGGACCGC
CACTTCGACT ACCTGCAGGA AGGCCTGAAG TACGAAAAGC TGCTGCTCAA AAAGGGCCCG
ATCAACGTGC CAGGGTATGA AGAGCTGAAA GCCCAAGCCG AAAAGGCCCG CGCCTACGCC
GCGCAGGACA ACGCGCCTGA ATGCCTGACC CACAACGACT TCTTCAACCT CAACCTGCTC
TACGACGAAG AAGGCAACCT GTCGCTCATC GACTGGGAAT ACGCCGGCAT GTCCGACTAC
GCCAGCGATT ACGGCACCTT CGTTGTGACC TGCATGCTGA ACGACGAAGA AGCCGACCGC
GCACTGGAGC ACTACTTCGG CCGCACGCCC ACCCTCGAGG AGCGCCGCCA CAACTACGCG
TTCGTCGGCC TGGCCGGCTG GTGCTGGTAC GTGTGGTCGC TACAGAAGGA ATCCGAAGGC
GACTATGTCG GCGAGTGGCT CTACACCTAC TACCGCTACG CCAAGAAATA TCTGCCCAAG
GCCATCGAGC TGTATGAGCA GCCGCAGGAG TAA
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| Protein sequence | MITRNEFETL CAIRQNPGAT QRELADALGV SLGTVNNVHR SLTKAKLIEE GRITARGLKE
LRPYKVENAV IMAAGLSSRF APISYERPKG LLKVRGEVLI ERQIEQLMEA GVNEIVVVVG
YKCELFFYLE EKYGVQIVVN HEYASKNNHS TLMRVREMLG NTYICSSDDY FTTNPFEQYV
WKAYYSAEFS EGPTREWCME TDRKGRIEKV TVGGENAWYM TGHAYFDKAF SDRFVEILEA
EYDDPRTADK LWEELYIEHI DEFDMEIKEY EPDVIFEFDS LDELRDFDPL FLENVDSSIF
DNIVAVLGCD KSEIRDVYPL KQGLTNLSCH FTTDDGEYVY RHPGVGTEQM IDRSAEVQAL
NLAKSIGIDK TFVFENAKTG WKISKFIKNC RELDPRDDAQ LAEAMQVAHK LHGQNVSLDR
HFDYLQEGLK YEKLLLKKGP INVPGYEELK AQAEKARAYA AQDNAPECLT HNDFFNLNLL
YDEEGNLSLI DWEYAGMSDY ASDYGTFVVT CMLNDEEADR ALEHYFGRTP TLEERRHNYA
FVGLAGWCWY VWSLQKESEG DYVGEWLYTY YRYAKKYLPK AIELYEQPQE
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