Gene Shel_14700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14700 
Symbol 
ID8395360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1686826 
End bp1688010 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content60% 
IMG OID644986224 
Productglycosyl/glycerophosphate transferase, teichoic acid biosynthesis 
Protein accessionYP_003143839 
Protein GI257064167 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000310897 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTTCATCT ATACGATAGC GCTCAACGCA ATGGACGCCG TGTATGCGGC CTGCTCCATA 
CGCGGCAAAC GCGACCGCAT CGTCCTCATG TCGCGGCAGG GGAGCAAGCC GTCGCTGGAT
CTGCGTATGC TCGCCGACGA GTTGCATCGT CGCCTGCCGC AGGCCGAAGT GGTGCTGTGC
ACCACCGACT CGGAGCGCAA GAACATGTTC GCCTTCATCA AATCCCTGTT CGTAATGGTC
AACCAATGCG CGCGGTCCCG CGTGTGCGTG CTTGAAAGCG CCATTCCGTC GGTCAGCATC
CCGAGGCATC TAGACAAACA GACCCGCGTC GTGCAGATCT GGCATGCGTT CGGCGCCATC
AAGAAGTTCG GCTACCAATC GCTGGATACG CCTGCGAACT ATTCGTCAGA GGCTGCATAC
GCCATGCGTA TGCACCGCAA TTACGACTAC ATCGTCGCCG CAGGTCCAGG CGCTATCGAT
GCGTATTCGA AGGCGTTCAA CTACGAACCG GACCGCATCG TGCCGTTGGG CCTGCCGCGC
ATGGACTACC TGTTGGATAC AGCTCCCGAA TCGCCGCATA TGCGCAATGT AGAACGGCTT
CGCCAAAAGC ATCCGTGTTT GGCAGACGAT GCGTTCAAGG TGCTGTACGT GCCAACCCTG
CGACGAGGTG CCGGCACCGA GGGCTGGATG ACGCGAGAGG TGGCGCGGCT TTCCCAGGCG
CTGCAGCCTT GCGGCTGCCG GCTTCTGGTG GCAGGCCACC CCTTGGATCC GGGCTGCGAC
AAGGAAGCGG CGAAAGCCAT GCGCAACGTT GAGTTCGTGC CGGGTGCCCC CAGCCGTGAC
CTGCTGTCTT TCGCCGACCG CGTAGTCACG GACTATTCGG CCATATCGTT CGAAGCGGCG
CTGGTGGGCA AGCCCGTGTA TTTCTATGTG CCCGACATCG TCGAGTACCG GCAATCCCCA
GGGCTCAACA TCGATCCACT GGAGATATTC CCCGAGGGGA CGTTCGTCGA CCCTGACGAG
CTGGCGGCAG TTGTTTCGCA GGAAGACACG TATGCGTCCG AGGCGTTTTC GAGGTTTGTG
GACGGTTATT TTGAAGGAAT TGGCCCAGGT TCATGCTCTC GCGTGGCGGA ATTCATCGAA
GAATGCTATC GTGATACACT CATTGAGCAG AAAGGCCATC GTTAG
 
Protein sequence
MFIYTIALNA MDAVYAACSI RGKRDRIVLM SRQGSKPSLD LRMLADELHR RLPQAEVVLC 
TTDSERKNMF AFIKSLFVMV NQCARSRVCV LESAIPSVSI PRHLDKQTRV VQIWHAFGAI
KKFGYQSLDT PANYSSEAAY AMRMHRNYDY IVAAGPGAID AYSKAFNYEP DRIVPLGLPR
MDYLLDTAPE SPHMRNVERL RQKHPCLADD AFKVLYVPTL RRGAGTEGWM TREVARLSQA
LQPCGCRLLV AGHPLDPGCD KEAAKAMRNV EFVPGAPSRD LLSFADRVVT DYSAISFEAA
LVGKPVYFYV PDIVEYRQSP GLNIDPLEIF PEGTFVDPDE LAAVVSQEDT YASEAFSRFV
DGYFEGIGPG SCSRVAEFIE ECYRDTLIEQ KGHR