| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_13660 |
|---|
| Symbol | |
|---|
| ID | 8395257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 1565225 |
|---|
| End bp | 1566274 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644986121 |
|---|
| Product | ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component |
|---|
| Protein accession | YP_003143738 |
|---|
| Protein GI | 257064066 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATCA ATCCCGCATC TCTTGCTGGC TTGTCCCGTC GATCGTTCAT GAAGGTTGCA
GGTGCTGCAT CGGTTATCGC CGCAGCAGGG CTTTCAGTCG GATGCGCCCA GCAGGGTGGA
GATGGCGCCC CCGCAAACAC GGACGGCCTT ACGGAAATTT CCTTCGTGCT CGACTACACC
CCCAATACCA ACCATACCGG CGTGTACGTG GCCATTGCCA ACGGTTACTA CGAGGAGGAA
GGCTTGGCCG TGACCATCGT CATGCCGCCC GAGGACGGCG CCGATGCGCT TATCGGATCG
GGTGGCGCGC AGTTCGGCGT AACCTACCAA GACACCATGG CGAACTACCT TGCCAGCGAA
ACGCCGATGC CCTACACGGC TGTGGCTGCC GTGGTGCAGC ACAACACCAG CGGCATTATG
TCCCGCGCCG AAGACAACAT CACCAGCCCC AAGAAGATGG AAGGCCATAC CTACGCCACC
TGGAACCTGG ATGTTGAGCA GGCCACCATC CGCGACGTGG TGGAAGCTGA CGGCGGCGAT
TTCAGCAAGG TCGAAATGGT TCCCTACGCC GTTGACGACG ACGTTGCCGG CCTGCGCACC
AAAGCTTTCG ACACCGTGTG GGTGTACGAG GGTTGGGCCG TCCAGAATGC CAAGATCCAG
GACTTCGAAT ACAACTACTT CCCGTTTATC GAATTCGACT CCGCGCTGGA CTTCTACACG
CCGGTCATCG CTGTCAACGA CGAGTTCATG GCTGCGAACC CCGATGTGGT GAAGGCATTC
CTGCGCGCCA CGGCCAAAGG CTACGAGTTC GCGGTCAGCG ACCCGCAGGC TGCTGCCGAC
ATTCTTGTCG AGGCCGTGCC CGAGCTCGAT CCTGAGCTTG TTGCCGAAAG CCAGGAGTAT
TTGGCAGGGC AGTATATCAG CGATGCCGAG CGTTGGGGCG AATTCGATGC GGATCGCTGG
GCTGCCTACT ACCAGTGGCT CAACGACGAG AAGCTGGTTG CAACCGAGCT CGCAGTAGAC
GCCGGCTACA CCAACGACTA CCTTGCATAG
|
|---|
| Protein sequence | MSINPASLAG LSRRSFMKVA GAASVIAAAG LSVGCAQQGG DGAPANTDGL TEISFVLDYT
PNTNHTGVYV AIANGYYEEE GLAVTIVMPP EDGADALIGS GGAQFGVTYQ DTMANYLASE
TPMPYTAVAA VVQHNTSGIM SRAEDNITSP KKMEGHTYAT WNLDVEQATI RDVVEADGGD
FSKVEMVPYA VDDDVAGLRT KAFDTVWVYE GWAVQNAKIQ DFEYNYFPFI EFDSALDFYT
PVIAVNDEFM AANPDVVKAF LRATAKGYEF AVSDPQAAAD ILVEAVPELD PELVAESQEY
LAGQYISDAE RWGEFDADRW AAYYQWLNDE KLVATELAVD AGYTNDYLA
|
|---|
| |