Gene Shel_13410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13410 
Symbol 
ID8395232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1535595 
End bp1536902 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content59% 
IMG OID644986096 
Productphenylacetate-CoA ligase 
Protein accessionYP_003143713 
Protein GI257064041 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTATC AGGAAGACAT CGAGTGCATG CCTCGTGAGG AGCTTGAGAA GCTGCAGTTG 
GAACGGCTCA AGCAATCCCT CGTGCATGCC TATGAGAAGA TTCCGTTCTA CAAGGAGCGT
TTCGACGCCG CAGGAGCCGA CCCCTATGCT GTCAAGTCAC TGACCGATCT TGCCAAATTC
CCCTTCACGG TAAAGCAGGA CATCCGTGAC AACTATCCGT TCGGCATGTT CGCAGCTGAT
AAAAAGGACC TCAAGCGCAT CCACGCATCT TCCGGCACCA CCGGCATGGC TACCGTCATT
GGCAGCACCG AGCAGGACCT GAAGAACTGG GGCGACTGTT TCGCCCGTGG CATCGCCATG
GTGGGCGGCA GCGAAGAGTC CACCATCCAG ATTTCCTACG GTTACGGTCT GTTCTCCGGC
GGACTGGGCG CCCATCTGGG CGGCGAGGCC ATGGGCTGCG CCATCGTACC TGCATCCACC
GGCAACACCA AGCGCCAGGT CCAGCTCATG AAGGATTTCG AAGTCGACAT TCTGGCCTGC
ACGCCTTCCT ACGCGCTGCG CATCGCTGAC GAAGCGATAG CCGAAGGACT CGACCCGCGT
ACCGATTTGA AGGTGTCCGG TGCAATCCTG GGTGCCGAGC CTGTGTCGCC CGGCATGCGC
GAGGAAATCC AGGAGAAGCT CGGCGTGAAA TACTGCGACG TGTACGGCTT GTCCGAGGTC
ATGGGTCCAG GTGTTGCCAT GGAATGCGGC CACGGCCACG GCATGCATAT CGCCGAGGAC
CACTTCTTGG TTGAAATCGT CGACCCCGAA ACCATGGAGC CGCTGCCGGT GGGCGAATGG
GGCGAGCTCG TCATCACAAC GCTCACCCGC GAATGCTGCC CCATGATTCG CTACCGCACC
CGCGACCTGA CGCGGCTCAT TCCCGAGCCC TGCACCTGCG GACGCACCCA TCATAAACTC
GACCGTCTGA AGGGCCGCAC CGACGACATG CTCATCATCC GCGGCGTGAA CGTGTTCCCG
TCCCAGATCG AGCAGGTTAT CACGCAGTTC CCCGACGTGG CTACGCACTA CCAGATCGTG
CTCACCACCA AAGACGGCTT GGACAACTGC GAGGTCCAGA TCGAGACTGT GGACGATTTC
CCGTTCGATG AGATCCGCAA ACTCGAGAAG CTCCGCAACG ACCTGATGGC CGAGTTCAAG
AGCAACCTGC AGATTAAGGT GAACGTACGC ATCGTGGAGC CGAACACCAT CGCACGCAGC
GAAGGCAAGG CCAAACGAAT CATCGACAAA CGAGAGGGGT TGGCATAA
 
Protein sequence
MYYQEDIECM PREELEKLQL ERLKQSLVHA YEKIPFYKER FDAAGADPYA VKSLTDLAKF 
PFTVKQDIRD NYPFGMFAAD KKDLKRIHAS SGTTGMATVI GSTEQDLKNW GDCFARGIAM
VGGSEESTIQ ISYGYGLFSG GLGAHLGGEA MGCAIVPAST GNTKRQVQLM KDFEVDILAC
TPSYALRIAD EAIAEGLDPR TDLKVSGAIL GAEPVSPGMR EEIQEKLGVK YCDVYGLSEV
MGPGVAMECG HGHGMHIAED HFLVEIVDPE TMEPLPVGEW GELVITTLTR ECCPMIRYRT
RDLTRLIPEP CTCGRTHHKL DRLKGRTDDM LIIRGVNVFP SQIEQVITQF PDVATHYQIV
LTTKDGLDNC EVQIETVDDF PFDEIRKLEK LRNDLMAEFK SNLQIKVNVR IVEPNTIARS
EGKAKRIIDK REGLA