| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_13280 |
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| Symbol | |
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| ID | 8395219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1517741 |
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| End bp | 1519681 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644986084 |
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| Product | PTS system D-fructose-specific IIA component (F1P-forming)/PTS system D-fructose-specific IIB component (F1P-forming)/PTS system D-fructose-specific IIC component (F1P-forming) |
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| Protein accession | YP_003143701 |
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| Protein GI | 257064029 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR00848] PTS system, fructose subfamily, IIA component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.839336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATTG TCGACCTGCT GAAAGAAGGT AGCATTAAAA TCGGCGCGAC CGCGGCCGAT
AAGCCTGATG CTATCGAGCA GTTGATCGCC CTGCATGAAA AGGCAGGAAA CCTCAACGAC
GTGGAGGAAT ACCGCAAGGC AATCCTCGCA CGCGAGGCCG GCGGTACCAC CGCCATCGGC
GAGGGCATGG CAATCCCCCA CGCCAAGACC GATGCTGTGG CGCAGCCTGC GCTTGCCGCG
ATGACCGTGC CCGACGGCGT CGACTACGAG GCGCCCGACG GAAAGCCGTC GAACCTCCTG
TTCATGATCG CCGCCCCCTC CGATGGCGAC GTTCACTTGG AGGTCCTCTC ACGCCTGATG
ACCATGCTCA TGGATATGGA CTTCCGCAGC AAGCTTCTGG GCGCCTCCAC GCCTGCCGAG
TTCCTGCAGA TCATCGATGC CAAGGAAATC GAGAAGTTCG GCGAGCCCGA GCCTGCAGCT
GAAGCCACCG CTCCTGCTGC TGCAGCCGTT GCAACTGCTG AGCCCGAAGG CTACCGCGTC
CTGGCGGTTA CCGCCTGCCC CACCGGCATC GCGCATACCT ACATGGCGGC CGAAGCCTTG
GCACAGGAGG CCGAAAAGAT GGGTGTGCCC ATCAAAGTCG AGACCAACGG CTCCGGCGGT
GCGAAGAACA TCCTGACGGC CGATGAGATC GCCGCTGCCG AAGGCATCAT CGTGGCTGCC
GACAAGAACG TCGAAATGGC CCGCTTCGAC GGCAAACCAG TCGTGATCAC CAAGGTTGCC
GACGGCATCA ACAAGCCTAA GGAGCTCATC AACCGCGCCC TTGACGGGTC GGCTCCTCTG
TACCACCATA CCGGTGCCGT TGATTCCGCA GCCGATTCCG CCGAAGGCGA AAGCATCGGC
CGCCAGATCT ACAAACACCT GATGGAGGGC GTCTCCCACA TGCTGCCCTT CGTCGTCGCA
GGCGGTATCT TCATCGCCCT GGCGTTTTTG ATCGACACCC TGCTGGGCGC TCCTCAGGAC
GGCAACTTCG GCAGCAACAC GCCGGTCGCA GCCTGGTTCA AGGGCATCGG CGGCGTCAGC
TTCGGTTTCA TGCTGCCCAT CCTCGCAGGC TACATCGGCC GCTCCATCGC CGACCGCCCC
GGCCTTCTGG TCGGCTTCGT CGGCGGCTCC ATGGCAGCTG CGGGCTGCAC CTTCGCAGAC
CCCGCCGGCC AGGCCGTTTC CGCAGGCTTC TTGGGCGCCC TGCTCGCCGG CTTCGCGGGC
GGCTACTTCA TGCTCTGGTT CGAGAAGGTG TGTGAGAACA TCCCGCAGGC GCTTGACGGC
ATGAAGCCCA TGCTCATCTA TCCTCTGGTC GGCCTCGCCT TCATCGGCAT CTTCATGTGC
GCCGTCAACC CCATCATGAT CGCCATCAAC GCCGGCATCA GCTCATTCCT GACCAGCCTC
GGCAGCGCCA AGATTCTGCT CGGCATCCTG CTGGGCGGCA TGATGGCCAT CGACATGGGC
GGCCCCATCA ACAAGGCGGC TTACCTGTTC GGCCTGGCAG CCATCGAATC CGGCAACTAC
GACATGATGG CAGCCGTCAT GATCGGCGGC ATGGTTCCGC CGCTGGCTAT CGCTCTGGCC
TGCACCTTCT TCAAGGATCG CTGGACCGAG ACCGAGCTTA AGAGCGCTCC TGTCAACTAC
ATCATGGGCC TTTCCTTCAT CACCGAAGGC GCCATCCCCT ACGCCGCAGC CGACCCGCTG
CGCGTCATCC CCGCATGCGT CGTAGGCTCC GCCGTCGCAG GCGCCATCTC CATGGCCTTC
GGCTGCACGC TCATGGCTCC CCATGGCGGC ATCTTCGTAT TCGCCGTCGT CGGCAACTGG
CCCATGTACC TGGTGGCCCT GGCCATCGGC GCCGTGGTCG GCGCCCTCAT GCTGCGCGTC
CTGAAGAAGA AGGTCGCATA A
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| Protein sequence | MRIVDLLKEG SIKIGATAAD KPDAIEQLIA LHEKAGNLND VEEYRKAILA REAGGTTAIG
EGMAIPHAKT DAVAQPALAA MTVPDGVDYE APDGKPSNLL FMIAAPSDGD VHLEVLSRLM
TMLMDMDFRS KLLGASTPAE FLQIIDAKEI EKFGEPEPAA EATAPAAAAV ATAEPEGYRV
LAVTACPTGI AHTYMAAEAL AQEAEKMGVP IKVETNGSGG AKNILTADEI AAAEGIIVAA
DKNVEMARFD GKPVVITKVA DGINKPKELI NRALDGSAPL YHHTGAVDSA ADSAEGESIG
RQIYKHLMEG VSHMLPFVVA GGIFIALAFL IDTLLGAPQD GNFGSNTPVA AWFKGIGGVS
FGFMLPILAG YIGRSIADRP GLLVGFVGGS MAAAGCTFAD PAGQAVSAGF LGALLAGFAG
GYFMLWFEKV CENIPQALDG MKPMLIYPLV GLAFIGIFMC AVNPIMIAIN AGISSFLTSL
GSAKILLGIL LGGMMAIDMG GPINKAAYLF GLAAIESGNY DMMAAVMIGG MVPPLAIALA
CTFFKDRWTE TELKSAPVNY IMGLSFITEG AIPYAAADPL RVIPACVVGS AVAGAISMAF
GCTLMAPHGG IFVFAVVGNW PMYLVALAIG AVVGALMLRV LKKKVA
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