Gene Shel_13150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_13150 
Symbol 
ID8395206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1504051 
End bp1505361 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content61% 
IMG OID644986071 
Producthistidine kinase 
Protein accessionYP_003143688 
Protein GI257064016 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAGA ATCTCCGCAC GAAATTCGTC GCCTACACCA TGGCCATGGT TTCCGCCGTG 
GTCATCGTCA CGTTCGCTGG AATCGCCGCA TACAGTTACC AGAACGAGAT GAACAGCTTG
GACATGGCGC TTGAACACGC GGTTTCCGAT GACCGCGCCG TGGGTGGAAA AGACGGCATG
GCAGGCCCGC GGTCGGACGA CACGCAGGCG CCTTTTGCCG ATGGGAACAT GGACGAAGTA
CCGGACGGCC AGATGGCAGG ACCGCAGATC GGCGGCGGTG CAGGACGCGA ACAGCTCATT
CCCGTTGCCG TGTACCTGCA GGCAGAAGAC GGCTCCCTGA GTTCCCAACC GGGCCTTGCC
ACGGCGCTGA TTTCCGACGA GGTCCTCGCA TCCGTGAGCC CAGACATCTT GGACGCCGCC
GACGGCAAAG GATACCTGAG CGACGCCGGG CTGTACTACC TGAAGCGCAC CACCGATTCG
TGCATTTACG TCGCTTTTGC CGACGAAAGC TCCGTCAGCA ACTGGAAGTC ACTGGCCTTG
GCGCTGGTCT TCGCGGGCGT CGGCGTTCTG GCGCTGTTCT TCGTGCTGAG CATCTTCCTC
TCCCGCTGGG CGCTGCGTCC CGTGGAGGAA GCCTGGACCG CTCAGAAGCA GTTCGTGGCC
GACGCGTCGC ACGAGCTCAA AACGCCGCTG ACGGTGATTC TGGCGAACGC ATCCATCCTG
CTGAAGCACC CGGAGCGTTC CATCGCGCAA GAAAGCCAAT GGATAGAATC CACCCAGGTG
GAGGCTGAAC GCATGCAGGA TCTGGTAAGC GACATGCTCA CGCTTGCGCA GGTGGAATCC
GCATCCCGGC CCGAGCATTC CGACGTGGAT TTCAGCACGC TGGTCGACGG CATATCGATG
CAGTTCGACT CGGTCGCCTA CGAGAACGGG GTGTATCTGG ACACCCAGGT GGAAGAGGGC
ATCCATGTGA ACGGCAACGT GAAGATGCTG GACAAGCTGG TGGCCACGCT TATCGAGAAC
GCCTGCAAGT ACGCAGGCAC AGGCGGCTCC ATCGACGTGA AGCTGTTCCG CACGTCCCAT
CAGATCAGGC TCGACGTCCA TAACACCGGA AACCCCATCC ACCCTGAAGA CCTGGCACAT
ATCTTCGACC GGTTCTACCG TGCCGACAAG GCACGCACCC ACGAGGACAG CAGCTTCGGA
TTGGGTCTGG CCATCGCCCG CTCGATCGCC GAGGAGCACG GCGGCACCAT AGAGGCCACA
AGCTCCGAGG CCGAAGGCAC CACCTTCTCG GTCACGTTGC CGGCCATGTA G
 
Protein sequence
MLKNLRTKFV AYTMAMVSAV VIVTFAGIAA YSYQNEMNSL DMALEHAVSD DRAVGGKDGM 
AGPRSDDTQA PFADGNMDEV PDGQMAGPQI GGGAGREQLI PVAVYLQAED GSLSSQPGLA
TALISDEVLA SVSPDILDAA DGKGYLSDAG LYYLKRTTDS CIYVAFADES SVSNWKSLAL
ALVFAGVGVL ALFFVLSIFL SRWALRPVEE AWTAQKQFVA DASHELKTPL TVILANASIL
LKHPERSIAQ ESQWIESTQV EAERMQDLVS DMLTLAQVES ASRPEHSDVD FSTLVDGISM
QFDSVAYENG VYLDTQVEEG IHVNGNVKML DKLVATLIEN ACKYAGTGGS IDVKLFRTSH
QIRLDVHNTG NPIHPEDLAH IFDRFYRADK ARTHEDSSFG LGLAIARSIA EEHGGTIEAT
SSEAEGTTFS VTLPAM