Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_12790 |
Symbol | |
ID | 8395170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1466602 |
End bp | 1467327 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644986035 |
Product | transposase |
Protein accession | YP_003143655 |
Protein GI | 257063983 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1943] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGATT CCGACATCTA TCATGTGGTG GCTCGCGGCG TCGGCCGTTG CATCATTTTC GAAGACGACG CCGATCGCAA GAAATACCTG GGAATACTTG ATACAACCCG CGAGAAGCAT CAGCTTGCGC TGCTCGCCTG GTGTCTTATG GACAATCATG TCCACTTGCT CATAAAAGGC GATCTGACCG CCCTGTCAGA CGGTATGCGA GCGCTCGATT CGGAATATGC GCAGTATTTC AACCTTCGAC ATGGGCGCGT CGGGCACCTG TTCCAGGGCC GTTTCAAAAG CGAAACGGTT GATACCGACC AATATTTTCT TACGGTGCTC CGCTACATCC ATCAAAACCC GGTGAAGGCT GGCATGACTT CGACTTGCGA TTATACGTGG AGCAGTTATC AGGAATACAT CGGCGAGCCT ATGCGGACGG ATACAGGCAT GGCGCTTTCG ATGCTTGACG GCGTCGATGG TTTCGTCGAA TTCCATCGGC AAGATGACCC TGGTGCCGGG TGTATCGACG TGAATACCGG AAGATGCCGT TACGAGGGCG AAGCGGCGAT CGTGGTCGCG AAGGAGGTTC TTGCGCCCGT GCGAATCGAA GAGGTGGCCG GTATGCCGCG GGAAGAAAGG AACGAGGCGC TCAAAACCCT GAAGGCAGCG CGGCTGTCTC TACGTCAAAT AGAACGGTTG ACGGGGGTTT CGAAAACCAC CGTTGCGAAA GCTTAG
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Protein sequence | MSDSDIYHVV ARGVGRCIIF EDDADRKKYL GILDTTREKH QLALLAWCLM DNHVHLLIKG DLTALSDGMR ALDSEYAQYF NLRHGRVGHL FQGRFKSETV DTDQYFLTVL RYIHQNPVKA GMTSTCDYTW SSYQEYIGEP MRTDTGMALS MLDGVDGFVE FHRQDDPGAG CIDVNTGRCR YEGEAAIVVA KEVLAPVRIE EVAGMPREER NEALKTLKAA RLSLRQIERL TGVSKTTVAK A
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