| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_12100 |
|---|
| Symbol | |
|---|
| ID | 8395101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 1393269 |
|---|
| End bp | 1394168 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644985967 |
|---|
| Product | ABC-type multidrug transport system, ATPase component |
|---|
| Protein accession | YP_003143587 |
|---|
| Protein GI | 257063915 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCTCA TACTGGATAG AATTACCAAG TCCTACAGCG GGAAAACCGC CGTCAACGGC
GTGTCCGCAA CCCTTGTCCC CGGCGTGACG GGGCTGCTCG GCGCCAACGG AGCCGGCAAA
ACAACCTTGC TGCGCATAAT CTGCGACATC CTGCAGCCGA CAGGCGGACG GGTCCTTTAC
GACGGCGAAG ACATCCGCGA GCTGGGACCC GCGTACCGCT CCCTGTTGGG ATACCTTCCC
CAGGATTTCG GATACTACCC CTCGTTCACC GCGCTGGACT TCATGTGCTA CATGGGCGCG
CTCAAGGGGT TCGACAAACG CGAAGCGCGC GAGGCCGGCG CGAAGCTGCT GGAGGAAGTG
GGCCTTGGCG ACGACGTGCA CCGCAAGGTG AAAACGTTTT CGGGAGGCAT GAAGCAGCGG
TTGGGAATCG CCCAGGCCAT GCTTGGAAAC CCTGCCATCC TGGTGCTGGA CGAACCCACG
GCGGGCCTCG ACCCCAAGGA ACGGGTGCGC TTCCGCAACC TGATCGCAGG CTTCGCGCAG
GACCGGATCG TGCTTCTGTC GACCCACATC GTAAACGACA TCGAGTTTGC GGCCAACCGG
ATTCTCGTCA TGAACGAAGG CATGCTCATT ATGGACGGCG CGCCGGAACA CGTGGTCGCG
CAGGCTGCAG GCAAAGTGTG GGAATGCACC GTGGATGCGC AGCAGGCCGA AGAGATGACC
GAGCAGATGC CCGTAGCGAA CGTCCGGTAC GCGCCGGACG GGCATGCGGT GGTGCGCGTT
GTGACCGATA CGTCCCCGAT GGAAGGCGCC GTTGCGGTGG ACCCCACGCT CGAGGACCTG
TACCTGTATG TGTTCCGGAC CGACGGCAAT CAGGGGGTTC CAAATGGCAA CGCTGATTAG
|
|---|
| Protein sequence | MKLILDRITK SYSGKTAVNG VSATLVPGVT GLLGANGAGK TTLLRIICDI LQPTGGRVLY
DGEDIRELGP AYRSLLGYLP QDFGYYPSFT ALDFMCYMGA LKGFDKREAR EAGAKLLEEV
GLGDDVHRKV KTFSGGMKQR LGIAQAMLGN PAILVLDEPT AGLDPKERVR FRNLIAGFAQ
DRIVLLSTHI VNDIEFAANR ILVMNEGMLI MDGAPEHVVA QAAGKVWECT VDAQQAEEMT
EQMPVANVRY APDGHAVVRV VTDTSPMEGA VAVDPTLEDL YLYVFRTDGN QGVPNGNAD
|
|---|
| |