| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_11960 |
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| Symbol | |
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| ID | 8395087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1376636 |
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| End bp | 1378372 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985953 |
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| Product | putative cell wall binding protein |
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| Protein accession | YP_003143575 |
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| Protein GI | 257063903 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000480831 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.155715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACGCA CCTCCGTCAT TCCTCCCTGG AAAAACGCCC TAGCTCGTCA GGAGGTGAAG
TCTGCGCCCT GGCGCGCAAT GCTCGCGATG CTCGCGTGCA TGGTGGCGAT AGCGTGCGCG
GTTTGTTCGG CGCAGCCGCG CGAGGCCTAT GCAGCGTGGG AACAGAGGAC TGACCCGACT
ATCAACGAGT ACATAAAGTC CGGTCTGAAC AGCGACGGCA CCGTCGATGC ATTCGTGGAG
ATCGACTTCG ACGACGTGGG CTACGCCAAC AGCAATTCCG GGCTCGCCGA CGCCTACGAC
CACAGGGCCT TGTATGTGCA GTTCTGCTAC CGAAGCGCGG TGAGCTCGCA GGATCCGGAG
TATTCCCAAG AGTACGAGGC AGGGTTCTGC CCCTATTACT ATATTCCAGA GTCTCTACTG
GGCGGGACCT TCTGGATCGA AATAGAGGAC TACAGCTACT CGCGCACGTA CGTCTCCGAG
CCTATAACGG TGAACCCGTC GGGCGATGAC GGGGGCAACC TCCGCTGGTC CTTTAGCCCG
GCGAGCAGGA CGCTCACGAT CTCCGGCGTG GGCGACATGA CCGAATTCGA GGGCGAGACC
CCTTGGATGG GCATGTACCA CGACACCGAT GCCGTCGTGA TCGAGGACGG CGTCACCTCC
ATCGGCGACT ATGCGTTCTA CGGCTTCGAG GGCCTCAGGC TGGTCGACGT TCCCAAGTCT
GTGACGTCGA TTGGGACCAG AGCGTTTTGG CTTTGCGGCC ACGACTTGGT GATCCGCGGC
TACGCTGGCA CCGAAGCGGC CCACTTCGCG CACGATAGCG GACGGCTCTT CGACTGCGTC
GACGGCGACC TTGGTGCGAT GACAATCGAC CTTACCGCAG GCGGCGTTAC ATATGATTAC
TCCAGCGCCA AGAAGGCTGC CCCTAACAGT ACGTTTTACT CCTTGAGCTG GACCGACTTG
AATGGCGACG AGCTTATCGA TTGGAGGCCG TCCGACACCG GCGACGATGA CGATGGCTAC
GACCTGGACA AAGACGGCAA TGTCGACGTG ACGGAGTCGT GGAAGGACGC GCGCTACGTG
ACGTTCAAGA AGGCTCCCGC CTGCAGCTTA GAGGGTTCGG TGACGTACAA GCTCACGCCC
GAGCGCAGGT ACCTAGCGGC AAGCCTCAAC CCCGAGGGCT ACTTCCACAG CGAGCTCACC
GTGGTGCTGT CCTACAAGCA GGGCTGGAAC AAGGTGGACG GCTCGTGGTA CTACATGACC
GACGCCAAGG GCACCAAGGC CAAGGGCTGG AAGGCGATAG GCGGGCGCTG GTACTTCTTC
GACAAGTCTT CGGGCGCCAT GAGGACCGGC TGGCTGAAGG ACGGCGGCAC CTACTACTAC
CTGGCCCCTG CGAAAACCTC GGCGGGCGAC CCGCAAGGCG CCATGCTGAA GGGATGGCAG
AAGGTGGGCG GCAAGTGGTA CTACCTCGGC ACCGACGGCA AGATGGTGAC GGGCTGGAAG
ACCATCGGCG GCAAGCAGTA CTGCTTCAAG CCCTCGGGCG CCATGGCGGC GGGCGAGTGG
TACGGCGGCT GGTGGCTGAG TGGCAGCGGC GCCTGGACCT ACCCGTACAA GGGCTCGTGG
AAGCAGAGCT CGAAGGGGTG GTGGTTCGGC GACACCAGCG GCTGGTACGC GAAGAACCAG
ACGCTGAAGA TCAACGACAA GAACTACACC TTCAACTCCG CAGGTTACAT GGTATAG
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| Protein sequence | MLRTSVIPPW KNALARQEVK SAPWRAMLAM LACMVAIACA VCSAQPREAY AAWEQRTDPT
INEYIKSGLN SDGTVDAFVE IDFDDVGYAN SNSGLADAYD HRALYVQFCY RSAVSSQDPE
YSQEYEAGFC PYYYIPESLL GGTFWIEIED YSYSRTYVSE PITVNPSGDD GGNLRWSFSP
ASRTLTISGV GDMTEFEGET PWMGMYHDTD AVVIEDGVTS IGDYAFYGFE GLRLVDVPKS
VTSIGTRAFW LCGHDLVIRG YAGTEAAHFA HDSGRLFDCV DGDLGAMTID LTAGGVTYDY
SSAKKAAPNS TFYSLSWTDL NGDELIDWRP SDTGDDDDGY DLDKDGNVDV TESWKDARYV
TFKKAPACSL EGSVTYKLTP ERRYLAASLN PEGYFHSELT VVLSYKQGWN KVDGSWYYMT
DAKGTKAKGW KAIGGRWYFF DKSSGAMRTG WLKDGGTYYY LAPAKTSAGD PQGAMLKGWQ
KVGGKWYYLG TDGKMVTGWK TIGGKQYCFK PSGAMAAGEW YGGWWLSGSG AWTYPYKGSW
KQSSKGWWFG DTSGWYAKNQ TLKINDKNYT FNSAGYMV
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