| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_11890 |
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| Symbol | |
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| ID | 8395080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1372379 |
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| End bp | 1373089 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644985946 |
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| Product | orotidine-5'-phosphate decarboxylase |
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| Protein accession | YP_003143570 |
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| Protein GI | 257063898 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000215744 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0186296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAACCG TGTTCGATTC CGTACCGCGC TCGGACCGCA TCATCGTGGC CCTGGACTGC
GATCGTGCGG AGGCGCTGTC GCTGGCCAAA CAGCTGCAGG GCAAGGCGAA ATGGATGAAG
GTCGGCATGA CCCTGTATTA CGCCGAAGGC CCCAACATCG TGGAAATCCT GGGGCTTCTG
GGGTACAAGG TGTTTCTGGA TCTGAAGTTC CACGACATCC CGCATCAGGT GGCGGGTGCC
GCCGAGTCCG CCGTTTTGGC CGGTGCCGAC ATGATCACCA TGCATGCCAT CGGCGGCATG
CAGATGATGG AAGCCGCCCA GAGGGCGGTG GACGAGTCCG GTTCCGACGC CGCAACGCTG
GCCATCACGG TTCTGACCAG TATGGATGAG GAGCAGCTTC ATCAGACCGG CGTGAACCGC
ACCATCCCCG AGCAGGTGCA GGCGCTGGCA ACACGTGCAT CCGACGCAGG GCTTTCCGGC
GTGGTGGCTT CGCCTCAGGA GGCGGGAATG CTGCGAAGGC TTCTGGGACC GGATGCATAT
ATAGTTACGC CCGGCGTGCG TCCCGCAGGC GCCGACCGCG GCGATCAGAG CCGCGTGGCT
ACGCCGAAGG AGGCCTTCGA CGCGGGAGCT TCCCACATCG TCATCGGCCG CCCCATCACT
CAGGCCGAAG ATCCTGTGGC GGCGTTCGAG GCCATCGCAG CCCAGCTATA G
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| Protein sequence | MLTVFDSVPR SDRIIVALDC DRAEALSLAK QLQGKAKWMK VGMTLYYAEG PNIVEILGLL
GYKVFLDLKF HDIPHQVAGA AESAVLAGAD MITMHAIGGM QMMEAAQRAV DESGSDAATL
AITVLTSMDE EQLHQTGVNR TIPEQVQALA TRASDAGLSG VVASPQEAGM LRRLLGPDAY
IVTPGVRPAG ADRGDQSRVA TPKEAFDAGA SHIVIGRPIT QAEDPVAAFE AIAAQL
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