| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_11880 |
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| Symbol | |
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| ID | 8395079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1371465 |
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| End bp | 1372385 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644985945 |
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| Product | dihydroorotate oxidase B, catalytic subunit |
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| Protein accession | YP_003143569 |
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| Protein GI | 257063897 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0167] Dihydroorotate dehydrogenase |
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| TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00147089 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0175843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCATGA GTGTGAACAT GCAAGTAAAC CTGGGCGGGC TGGTCATGGC CAATCCGGTG
ACGGACGCTT CCGGCACCTT CGCTGCAGGT AGGGAATACG CCGATTTCGC GGATGTGTCC
CGGATGGGCG CCATCACCAC CAAGGGCGTT TCGCTCAACG GGTGGGAAGG CAACGCCGCG
CCCCGCATCG CCGAGACACC CAGCGGCATG CTGAACTCCA TCGGATTGCA GAACCCTGGC
GTCGCGCACC TGTGCGAGGT GGACCTGCCG TGGATCAAAT CCATCGGTGT GCCGGCCATC
GTCAACGTGT CCGGCCACAG CCTGGAGGAA TACGTCGCTG TGGTCGAGGC TCTGGAGGCT
GACGGCCAGG CGGACGCCTA CGAGATCAAC ATCAGCTGCC CCAACGTGGA TGCGGGCGGG
CTCACCTTCG GCACGCATGT GCCCAGCGTG GAGGCCGTTG TCGGCGCATG CCGAGCAGCC
ACGAAGCGCC CGATGATCGT CAAGCTGACG CCCAACGTGA CCGACATCAC CGAGATCGCC
CGAGCCGCCG AAGCATCCGG CGCCGACGCG CTTTCCATGA TCAACACGCT TCTGGGCATG
GCCATCGACG TGCGCACCCG CAAACCCGTG CTGTCCCGCG TGGTGGGCGG CCTTTCCGGC
CCCGCGGTCA AGCCCGTCGC CCTGCGCATG GTGTGGCAGT GCCACAACGC GGTTTCCATC
CCCATTTTGG GCATGGGTGG TATCATGACG GGTGAAGACG CCATCGAGTT CATGCTGGCC
GGCGCCACCG CCATCGCCGT GGGCACTGCG AACTTCGTCA ACCCAACGGC CGTCACGGAC
GTGCTCGACG GCATGATTGC TTATTGCGAA CAGAACGGCG TCGAAGATGT CAACGAATTG
GTTGGAGGAT TGCAATGCTA A
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| Protein sequence | MGMSVNMQVN LGGLVMANPV TDASGTFAAG REYADFADVS RMGAITTKGV SLNGWEGNAA
PRIAETPSGM LNSIGLQNPG VAHLCEVDLP WIKSIGVPAI VNVSGHSLEE YVAVVEALEA
DGQADAYEIN ISCPNVDAGG LTFGTHVPSV EAVVGACRAA TKRPMIVKLT PNVTDITEIA
RAAEASGADA LSMINTLLGM AIDVRTRKPV LSRVVGGLSG PAVKPVALRM VWQCHNAVSI
PILGMGGIMT GEDAIEFMLA GATAIAVGTA NFVNPTAVTD VLDGMIAYCE QNGVEDVNEL
VGGLQC
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