| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_11750 |
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| Symbol | |
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| ID | 8395066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1355005 |
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| End bp | 1357674 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644985932 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_003143556 |
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| Protein GI | 257063884 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.276015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0378318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGAAA TGCCTAAGAA TTACGATGCT GCCCAGGTCG AGGAGCGCAT GCTCCAGAAA
TGGCTTGACG GCGGCTTCTA CGCGCGCAGC AAGGGTTCCG AGGACCGTAC GGTGGTCATC
CCGCCGCCCA ACGTCACCGG CATGCTGCAC ATGGGCCACG CGCTCGACGA CACCATCCAG
GACACCTTCA TCCGCTACTG CCGCATGCGC GGCTATTCCA CCCGTTGGAT TCTGGGTACC
GACCACGCCG GCATCGCCAC GCAGACCAAG GTGGACAAGA AGCTGAAGGC CGAAGGCATC
TCGCGTCTGG AAATCGGCCG CGAGAAGTTC CTCGAGGCCT GCCAGGACTG GCGCGTCCAG
TACGGCGGCA TCATCGTGGA GCAGATCAAG CGCATGGGCT GCTCGGTCGA TTTCGACGAC
GAGAAGTTCA CCATGTCGCC CGAATACGCC AAGGCCGTCC GCAAGGTGTT CGTGGACTGG
TACCACGACG ATCTGATCTA CCGCGGCAAA CGCATCGTGA ACTGGTGCCC CAACTGCACC
ACGGCCATCT CCGACGACGA GGCCGAGTAC CAGGACGAGC ACGGCCATCT GTGGCACCTT
CGCTACCCGC TGACCGAGCC GGTCGACGGT ATCGAGCACA TCACTGTGGC CACCACCCGT
CCCGAAACCA TGCTGGGCGA CACCGGCATC GCCGTGAGCC CCGATGATCC GGACAAGGCC
AAGTTCATCG GCAAGACCGT CATGCTGCCC ATCGTCAACC GCGAGATCCC CATCTTCTCC
GATTGGCACG TGGACGCGGG CTTCGGCACG GGCTTCGTGA AGGTAACCCC TGCTCACGAC
CCGAACGACT TCGCCATGGG CCAGGCCCAC GACCTGCCGC AGATCAACGT CTTCGACGAG
CATGCGGTGG TTGTGGAAGG CTACGGCGAG TTCACCGGCA TGGACCGCGA CGAGTGCCGC
GTAGCCATTG TGAAGTGGTT CGAGGACCAC GGCCTGCTGG ATCACGTCGA CGACCACGAC
CATTCCGTCA TGCACTGCTA CCGCTGCGAC TCCACCCTGG AACCCTGGCT GTCCGAGCAG
TGGTTCGTCG GTGTTGACAA GCTGAAGGGC CCCGCGCTGG ACGTCGTCAA CAACGGCCAG
GTCAAGTTCC ACCCGGACCG CTGGACGCAG ACCTACACCA CCTGGATGGA GAACCTCAAG
GACTGGTGCA TCTCGCGCCA GCTGTGGTGG GGCCATCGCA TCCCCGTGTT CTACTGCGAC
GAGTGCGGTT GGGAAGACGC CCTGATGGAG GATGTGGACA CCTGCCCGAA GTGCGGCGGC
CACGTGCATC AGGACGAAGA CGTGCTGGAC ACCTGGTTCT CCAGCCAGCT GTGGACCTTC
GCCACGCAGG GCTGGCCTGA TAACCTGGAC GAGCTTGAAG GCCACCATCC CACAAAGGTG
CTGGTCACCG CCCGCGACAT CATCGCACTG TGGGTGGCTC GCATGGTCAT GAGCTCGCTG
TACTTCACCG GTCAGATTCC CTTCGAGGAC GTGTTCATCT ACGCAACCAT CCTGGCCAAG
GACGGCAGTC GCATGTCCAA ATCCAAGGGC AACGGCGTGG ACCCCATGGA CCTCATCAAC
ATGTACGGCG CCGACGCCAT GCGCTACAAC CTGCTCACGC TGGTCACGGG CAGCCAGGAC
GTCAAGTTCG ACGCCGACAT CGACCCGAAG ACCCACGAGC TGCTGGGCTC GCCGCGCACC
GACGCCGCCC GCGGTTTCGT CACCAAGATC TGGAACGCGA GCCGCTTCGT CATGATGAAC
CTGGACGGCT ACACGCCCGG TGAGCCTGTG GCCGCAACCG CCGCCGACGC GTGGATTTTC
TCGCGCCTGG CCAAGCTGAC CAAGTCCATT ACCGATGGCA TCGAGGCCTA CGAGTTCGGC
GACGTGTCGC GCGAACTGTA CGACTTCTTC TGGAACGAGT TCTGCGACTG GTATATCGAA
ATGACCAAGG ACCGCCTGCG TGGCGAAGGG GAGGAGCGCG CCGTTGCCCA GCGCAACCTG
GTGTACGTGC TCGATACCGC CCTGCGCCTG CTGCACCCGG TCATGCCGTT CGTCACCGAG
GCCATCTGGG AGCATCTGCC CGTGGCCGAG GGCCAGCCGG CCTTGATGGT GGCCCAGTGG
CCCGACCCGG TCGATTACGA AAAGTGGGTC GACGACAATT CCGAGGTCGC TGTGGCTATG
GCCTGCGGCG TCGTGGGCGC CATCCGCTCC ACGCGCGCGC AGTACCGCCT GTCGCCCAAG
GCCGACGTGC CTGTTGTCGT GAAGGTGCCC GCAGCGTCCG AGGCCGCGCT TGCCGCTCAG
GCAGGGCTCA TCACGTCGCT GGCCCGCGTG AGCAACCTGA CCGTTGCTGC CAATGCCGAG
CGTCCCGCCG AAAGCGCCGC CGTCATCGCC GAGGGTTGCG AGGTCTACTG CGTGCTGTCC
GGTCTGGTCG ATTTCGCGGC CGAGCGCCAG CGCTTGGAGG CCGAGCAGAA GAAGCTTTCC
GGCGAGTACG CCAAGCTGGA AAAGAAGCTT TCCAACGAAG GCTTCGTCCA GAAGGCCAAG
CCCGAAGCGG TCGAGAAGGC CAAGGCCCAG TTTGCCGAGG TCGGCGACAA GCTTGCCCTG
ATTGCCGCCC AGCTTTCCGA ACTGGCCTAA
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| Protein sequence | MEEMPKNYDA AQVEERMLQK WLDGGFYARS KGSEDRTVVI PPPNVTGMLH MGHALDDTIQ
DTFIRYCRMR GYSTRWILGT DHAGIATQTK VDKKLKAEGI SRLEIGREKF LEACQDWRVQ
YGGIIVEQIK RMGCSVDFDD EKFTMSPEYA KAVRKVFVDW YHDDLIYRGK RIVNWCPNCT
TAISDDEAEY QDEHGHLWHL RYPLTEPVDG IEHITVATTR PETMLGDTGI AVSPDDPDKA
KFIGKTVMLP IVNREIPIFS DWHVDAGFGT GFVKVTPAHD PNDFAMGQAH DLPQINVFDE
HAVVVEGYGE FTGMDRDECR VAIVKWFEDH GLLDHVDDHD HSVMHCYRCD STLEPWLSEQ
WFVGVDKLKG PALDVVNNGQ VKFHPDRWTQ TYTTWMENLK DWCISRQLWW GHRIPVFYCD
ECGWEDALME DVDTCPKCGG HVHQDEDVLD TWFSSQLWTF ATQGWPDNLD ELEGHHPTKV
LVTARDIIAL WVARMVMSSL YFTGQIPFED VFIYATILAK DGSRMSKSKG NGVDPMDLIN
MYGADAMRYN LLTLVTGSQD VKFDADIDPK THELLGSPRT DAARGFVTKI WNASRFVMMN
LDGYTPGEPV AATAADAWIF SRLAKLTKSI TDGIEAYEFG DVSRELYDFF WNEFCDWYIE
MTKDRLRGEG EERAVAQRNL VYVLDTALRL LHPVMPFVTE AIWEHLPVAE GQPALMVAQW
PDPVDYEKWV DDNSEVAVAM ACGVVGAIRS TRAQYRLSPK ADVPVVVKVP AASEAALAAQ
AGLITSLARV SNLTVAANAE RPAESAAVIA EGCEVYCVLS GLVDFAAERQ RLEAEQKKLS
GEYAKLEKKL SNEGFVQKAK PEAVEKAKAQ FAEVGDKLAL IAAQLSELA
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