Gene Shel_11460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11460 
Symbol 
ID8395037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1305348 
End bp1305725 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content56% 
IMG OID644985904 
ProductProtein of unknown function (DUF1696) 
Protein accessionYP_003143530 
Protein GI257063858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.568663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGATT TCAACAACAG CGCATTCTTT AAGATGTCTC GCATCGACCC TAAGAAGATC 
GTCGGCGACG TGCAGCCGCT GATGGTGCAG AACGAGCAGA TCGTCGGCGC CTACAAGGCC
ATGCGCGACT ACGTGGTGTT CACCAACATG CGCGTCATCG CCGTCAACAT CCAGGGCGTC
ACCGGCAAGA AGAAGGACCT CACGTCGCTG CCGTATTCGA AGATCTCGGC GTTCTCCGTT
GAGACCTCCG GCACCTTCGA CATGGACAGC GAGCTGGAAA TGTACTTCAG CGGTCTGGGC
AAGGTGAAGT TCGAATTCAC GGGTTCGAGC GACATCGTGC AGATCGGTCA GATCATCAGC
GCGTACAGCC TGCGATAG
 
Protein sequence
MIDFNNSAFF KMSRIDPKKI VGDVQPLMVQ NEQIVGAYKA MRDYVVFTNM RVIAVNIQGV 
TGKKKDLTSL PYSKISAFSV ETSGTFDMDS ELEMYFSGLG KVKFEFTGSS DIVQIGQIIS
AYSLR