Gene Shel_11390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11390 
Symbol 
ID8395030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1297807 
End bp1298997 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content64% 
IMG OID644985897 
Productglycosyltransferase, MGT family 
Protein accessionYP_003143523 
Protein GI257063851 
COG category[C] Energy production and conversion
[G] Carbohydrate transport and metabolism 
COG ID[COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase 
TIGRFAM ID[TIGR01426] glycosyltransferase, MGT family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCGC TCTGGTTCTG CATCCCCGCT CATGGCCACA CCAATCCCAC CATGGAGGTC 
GTGCGCGAGC TCACAAGGCG CGGCCACGAG GTTCGCTATT ACTCGTTCGA GGAGTTCCGG
GCAAAGATCG AAGGTGCGGG CGCCCAGTTC GTCGCCTGCG ACTCCTTCCT GCCGCCCATT
GACGAGAAAG CCGAGAAGCG ACTCCGCAGG GTGTCCACCA CCGAGATGAG CGTGCAGTCG
TTCCGCACGG TCGCGAACCT CGATCCGGTC GTTTCCGAAG ACGTCGCGAC CTGGCGTCCC
GACGTGGTGG TGACCGACTC GGCGTGCTTC TGGGGCAAGC TGGCAGCGGT CAAGCACGGC
CTGCCTTGGG TGTGTTCCAC CACGACGTTC GCGTTCAACG AGTACTCATC CAAGTACATG
AGCTACAGCG CCTCAGAGAT GGCAGACATG GTCTTGGGCC TACCACGCCT GAACCGCGAG
ATCCGCAGGC TCCGGCCCCT GGGCTACGAG GTGAAAAGCG CGCTCGACAT CGTGCGCAAC
AAGCCCGGGG ACAACACCAT CGTCTACACC TCGCGGAAGT TCCAGCCATG CTCCGAGACG
TTCGACGAGG AGCATTACCG CTTTGTGGGA CCGTCGGTGC GCGATGTGGC TCCTAAGGAA
AAGAGCGGCA GGCCGCTGGT GTATGCCTCG CTCGGTACGG TGATAAACGA CCGTCCGGGC
TTCTACCGCA CGCTGATAAA CGCGCTGCGC GATGCCGATG CGGATCTCAT CATCTCGTGC
GGCAAGGCGT TTGACCCCGC GCAGCTGGGC GAACTGCCCA GCAATGTGCG CGTCGAGCAG
TACGTGGACC AGATGGAGGT GCTCTCGCGG ACGAGCCTGT TCGTCACCCA TTGCGGCATG
AACAGCGCGT CGGAGGGCAT GTGGATGGGC GTGCCCGAGC TGCTCTTTCC GCTGACCGGT
GAGCAACGCG CCGTGGCGAG ACGTGTCACG GAGGTCGGTG CAGGTGCGAT GCTCGAGGAA
CGAATGGCGA AAGACGCCGC GACGCTGCGC GAGGCGATAG TCGGCGCCCT GGAGGACGGG
CGGCTGAGAG AGGGCTCCAC GCGAATGCGC GATGACTTGC GCTCTTGCGC GGGCCCGGCT
GGCGCCGCGG ACTTCATCGA GCAGGTGGCA CGTCGTCCCG TGGGGGTTTA G
 
Protein sequence
MRALWFCIPA HGHTNPTMEV VRELTRRGHE VRYYSFEEFR AKIEGAGAQF VACDSFLPPI 
DEKAEKRLRR VSTTEMSVQS FRTVANLDPV VSEDVATWRP DVVVTDSACF WGKLAAVKHG
LPWVCSTTTF AFNEYSSKYM SYSASEMADM VLGLPRLNRE IRRLRPLGYE VKSALDIVRN
KPGDNTIVYT SRKFQPCSET FDEEHYRFVG PSVRDVAPKE KSGRPLVYAS LGTVINDRPG
FYRTLINALR DADADLIISC GKAFDPAQLG ELPSNVRVEQ YVDQMEVLSR TSLFVTHCGM
NSASEGMWMG VPELLFPLTG EQRAVARRVT EVGAGAMLEE RMAKDAATLR EAIVGALEDG
RLREGSTRMR DDLRSCAGPA GAADFIEQVA RRPVGV