Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_10870 |
Symbol | |
ID | 8394978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1241158 |
End bp | 1242042 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644985845 |
Product | methionine aminopeptidase, type I |
Protein accession | YP_003143471 |
Protein GI | 257063799 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0024] Methionine aminopeptidase |
TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.84065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000208596 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTACGACG GTCTGCCTAC GCCCGACCGC AACGATAAAT GCTGGTGCGG AAGCGGTAAG AAATACAAGA AATGTCATCT GAACAACGAT GAGCGCCTGC AGCGCCTCTA CGACGAGGGC TTCGAGGTGC CGTCCCGCGA TATGCTGAAG ACCCCCGAGG TCATCGAAGG CATCAAGCGC AGCGCCGAAG TGAACATCGG CGTGCTGGAT TACGTGGCGG AGCACATTCG CGCCGGCATC ACCACCGAAG AGATCGACCA GTGGGTCTAC AACTACACGG TGGAACACGG CGCAATCCCC GCGCCCCTCA ACTACGAAGG CTATCCCAAG AGCGTCTGCA CCTCGGTCAA CGAGGTGGTC TGCCACGGTA TCCCCAGTCC CGACGAAGTC CTTAAAGACG GCGACATCAT CAACGTCGAC TGCTCAACCA TCAAGGACGG ATACTTTTCG GATTCGTCCC GCATGTTCAT GATCGGCGAG GTTGACCCCG AGGTCAAGCG CCTGGTCGAG GTCACGAAGG CATCTGTCGA GGCGGGCATT GCCGCGGTCA AGCCGTGGTG CCAGCTGGGC GACGTGTCCG CGGCCGTCAA CAAAGTGGCC ACCGACGCGG GCTTCACGGT GGTCCGCGAG TTCGGCGGCC ATGGCATCGG CCTGGAGTTC CACGAGGACC CCTTCGTCAG CTTCGTCGAA CCCGCCAACA CGGGCATCAT CCTGGCGCCG GGCATGTGCT TCACCATCGA GCCCATGGTC AACCTGGGTG CCCAGCCCAT CGACATGTCC GACCCCAACG GCTGGACCGT CCGCACCAAG GACGGCAAGC CCACCGCCCA GTGGGAGGTT CAGCTGGTCG TCACCGAAAC CGGCTGCGAG CTGCTTTCCT GGTAG
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Protein sequence | MYDGLPTPDR NDKCWCGSGK KYKKCHLNND ERLQRLYDEG FEVPSRDMLK TPEVIEGIKR SAEVNIGVLD YVAEHIRAGI TTEEIDQWVY NYTVEHGAIP APLNYEGYPK SVCTSVNEVV CHGIPSPDEV LKDGDIINVD CSTIKDGYFS DSSRMFMIGE VDPEVKRLVE VTKASVEAGI AAVKPWCQLG DVSAAVNKVA TDAGFTVVRE FGGHGIGLEF HEDPFVSFVE PANTGIILAP GMCFTIEPMV NLGAQPIDMS DPNGWTVRTK DGKPTAQWEV QLVVTETGCE LLSW
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