Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_10700 |
Symbol | |
ID | 8394961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1223971 |
End bp | 1225311 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644985828 |
Product | MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
Protein accession | YP_003143454 |
Protein GI | 257063782 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00016615 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000172933 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGTCGAATA TCGATGTAAC GTCCGTCCTG CTGAACGAGC AGGACGGACG TATTCCGTCT GTTAACTTCA TCACCCTGGG CTGCGCCAAG AACGAAGTGG ACTCGGCCGA CATGCAGCGC CGACTGGTGT CGGCGGGTTT CGCGATCGTC GACGACGCCG AAGACGCCGA CGCCGTCATC GTGAACACCT GCTCGTTCAT CCAAGCCGCC ATCGAGGAGA GCATCGACGT CATCTTGGAG GTGGCCGGGC TCGCCAACAT CGCCGACGGC TCGTCCAAGC TCATCGTCGC AGGCTGCATG CCCGCCCGTT TCGGGGACGA TCTGGAATCC GAGCTGAACG AGGCCAGTGC TTTCGTTCCC TGCAGCAAGG AGGACGACAT CGTCGAGGTC GTCCAGCGTA CACTGGGCGT GAATCCCGCA CCCTTCGCCC GCGTGGACGT GGAAAGCGGC CCTGCGGCGG CCTATGTCAA GATCAGCGAC GGCTGCAACC GCTTCTGCTC GTTCTGTTCC ATTCCCTATA TCCGCGGACG TTACCACAGC TTCCCTTACG AGCGCATCCG CGCCTCGGTG GAGCAGTGCA TCGCCGAAGG CTCCGTGGAA ATCACCCTCA TCGGCCAGGA TACGGGCTGC TGGGGCTCGG ATTTCGAGGA GAAGTCCACC ACGGCGCAGC TTCTGTCGAA CCTGGCCGAA GAGTTCCCGG ATACGTGGTT CCGTATCATG TACGTCGAGC CCGACGGCAT AACCGACGAG CTGCTGGACG CCATCGCCGC GCATGACAAC GTCTGCGACT ACCTGGACAT GCCGCTGCAG CATGCCAATC CCGAGCTGCT GAAATCCATG CGCCGCAAGG GCAGCGCCCC TGAGTTCCTG AAGCTTCTGG AACGCATTCG AACCCGCGTG CCGGGCATCA CGCTGCGCAC CACGCTCATC ACGGGCTTCC CAGGCGAAAC CGAGGAGGCC TTCGACGAGC TCATGGAGTT TCTGGAGGAG GCCGACTTCG ATTACGTGGG CGTGTTCCCG TATTCGAGGG AGGAAGGCAC CCGCGCCTAC GACCTTCCCG ACCAGGTAGA AGAGGAGCTG AAGGTGGCCC GGGCCCAGGA GGTCCGCGAC CTGTGCGACG CGGTGGGGTC GGTTCATACC GCCGATCGCA TCGGGAAAGA GCTGGACGTG CTGGTGTTGG GTGCCGAAGA GGACGGCCAG CTGTTCGGAC GCGCCATGTG CCAGGCGCCT GATGTTGATG GCGTGGTATA CGTCGACGGA GGCGAAGTGG GCGAAATTGT CCGCGTTACA ATTGTGGACA CGCTTGCATA CGATATGGAA GGCGAAATCA TTCATGGCTG A
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Protein sequence | MSNIDVTSVL LNEQDGRIPS VNFITLGCAK NEVDSADMQR RLVSAGFAIV DDAEDADAVI VNTCSFIQAA IEESIDVILE VAGLANIADG SSKLIVAGCM PARFGDDLES ELNEASAFVP CSKEDDIVEV VQRTLGVNPA PFARVDVESG PAAAYVKISD GCNRFCSFCS IPYIRGRYHS FPYERIRASV EQCIAEGSVE ITLIGQDTGC WGSDFEEKST TAQLLSNLAE EFPDTWFRIM YVEPDGITDE LLDAIAAHDN VCDYLDMPLQ HANPELLKSM RRKGSAPEFL KLLERIRTRV PGITLRTTLI TGFPGETEEA FDELMEFLEE ADFDYVGVFP YSREEGTRAY DLPDQVEEEL KVARAQEVRD LCDAVGSVHT ADRIGKELDV LVLGAEEDGQ LFGRAMCQAP DVDGVVYVDG GEVGEIVRVT IVDTLAYDME GEIIHG
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