| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10380 |
|---|
| Symbol | |
|---|
| ID | 8394929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1181701 |
|---|
| End bp | 1182477 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644985796 |
|---|
| Product | ribonuclease HII |
|---|
| Protein accession | YP_003143422 |
|---|
| Protein GI | 257063750 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0164] Ribonuclease HII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000218298 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000000118399 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACCG TGGCCGAGAT TCGCAAGGCG TTGCAGAACG CCGATGAAGA GCAGTACGAG
GTGCTGTCGC GCGCTTTGGT GGCCGATGAG CGCAAAGGGG TGAAGTCGGC GCTGGCTGCA
GCCCGAAAGC GTCTCGATGC TCAAGCCGCA GAGGCTCTGC GGCTTGAAAG CATGTATGCG
ACGGCGTCTG CTCTGGCCGG GGGCGGATTG GCCATGGGTC TTGACGAAGT GGGGCGGGGA
CCTGTCGCCG GCCCCTTGAC GGTCGCCGCT GTCGTTCTGC CAGACGCACC CCGGATCGAA
GGGCTGAACG ATTCCAAGCA GGTGGCGCCT GCTGCCCGCA CCCGCATGGC TGAAAGCATC
AAGGCCTGCG CATTGGCCTG GGATATCGAA TTCATCGAAC CTCACGACAT AGACGCTTAC
GGCATGTCCG CCTGCTTGAG GACTGCGTTT GGGCAGGCCA TCGCCGCGAT AGACGAGCAG
TTGTCTGGCG TGGCCGCCGT GCTTCTGGAC GGCAACCCGT TGCATATCGA TCCCCGAGAG
CGAAACATCA TCAAAGGCGA TGCGAAGTGC GCCCCGATTG CTGCGGCATC CATTATCGCG
AAGGTCGAGC GGGATGCGCT CATGTGCGAA TATGCCAAGG AGTACCCGCA GTACGGGTTC
GACTCCAACA AGGGGTACGG CTCGGCCGAC CATATCGAAG CCATCCGCAC GTACGGCCTC
ACCCCTGTCC ATAGGGCGAG TTTCTGCCAT GCGTGGGCTC AGGAATCGTT GTTCTGA
|
|---|
| Protein sequence | MRTVAEIRKA LQNADEEQYE VLSRALVADE RKGVKSALAA ARKRLDAQAA EALRLESMYA
TASALAGGGL AMGLDEVGRG PVAGPLTVAA VVLPDAPRIE GLNDSKQVAP AARTRMAESI
KACALAWDIE FIEPHDIDAY GMSACLRTAF GQAIAAIDEQ LSGVAAVLLD GNPLHIDPRE
RNIIKGDAKC APIAAASIIA KVERDALMCE YAKEYPQYGF DSNKGYGSAD HIEAIRTYGL
TPVHRASFCH AWAQESLF
|
|---|
| |