| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10340 |
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| Symbol | |
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| ID | 8394925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1178865 |
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| End bp | 1180094 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985792 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_003143418 |
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| Protein GI | 257063746 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0729922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000167703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCCTTCAA CTAGGTTCCA TGTCGTCAAC CTGGGTTGCA GGGTCAACCG GGTTGAAAGC
GATTCTTTCG CGGCATCGCT CGTCGCCCAT GGCGGCGAAT CGGTCCCCGT GGAAGACGCC
GACCTCGTCA TCGTCAATAC CTGCACTGTC ACAGGCGAAG CGGAAAAGAA GACCCGCAAG
GCCGTGCGTC GCGTGCTGCG TGAAAACGCA TCGGGCACCG TGGTGGTTAC CGGGTGCGCC
GCCGCCATCG ACCCGGATAC TTACGGCAAC ATGGACAGCC GCGTAGTCGT GGTTCCCAAG
GGGTCTATGG CTGCGTACGT GTCTCATGCC GTGTCGGGCG AAAGCCCCGT CGCCGTGGCC
GAAGGCGGAG CGGTGGGGTC GCTGTTCGGC GACGAGTTCC GCATGGGGGA GGATTTCCCG
ACCCGCGTGG GCATCAAGGT CCAAGACGGC TGCAACAACG CCTGCACGTT CTGCATCGTG
CATGTGGCCC GAGGCCGTGC GTGGTCTCGT CCTTATAAAG ATGTGGTTGC CGAAGCCGGC
GAATATGCGC GCCGAGGTGT GCGGGAAATC GTTCTGACCG GCATCAATCT GGGAGCTTAC
CGGACGGAGG ATGCCGATCT GGTCCGTCTG CTGGACGGCC TGCTCGAAGC GGCGCCGAAT
ACGCGGTTCC GCTTGTCCTC GGTCGAGCCG CATACCCTCT CGGATGACTT CATCGGATTG
ATGGCCGCCT CCGACGGACG CATCTGCCGA CATCTGCACC TGCCTCTCCA GTCGGGTTCG
ACGAAGGTTC TCAAGGAGAT GGCGCGGCCC TATACGGCTC AGGATTTCAT GGGGTTGGTG
GACCGTATGT ATGAAGCGGT GCCGAGCCTG TCGCTGTCCA CGGACGTCAT CGTGGGTTTT
CCCGGCGAGA CGGAACGGGA CTTCCAAGAC ACCTGCGATG TAGCGCGGGC CTGCCGGTTT
TCCAAGATGC ACATCTTCAG GTACTCCATG CGTGCGGGTA CCCCTGCCGC ATTGAGGTCA
GACCAGATAT CGCCCGAGGT GAAAGCCGAG CGGGCTGCAA AGCTGGATGC GATCGAACAT
GAACTGTGCG CACAGGATCT GGCCCGTCGC AAAGGGACGT GCGAGTTGGC GTTGGTGGAG
ACCGACGGAA TTGCCACAAC CGAGAGCTAT CATTCGGTTG CAGCGCCTGT ACAATCGCAG
GTAGGCGATT TGGTTCCCTA TATCTTCTAG
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| Protein sequence | MPSTRFHVVN LGCRVNRVES DSFAASLVAH GGESVPVEDA DLVIVNTCTV TGEAEKKTRK
AVRRVLRENA SGTVVVTGCA AAIDPDTYGN MDSRVVVVPK GSMAAYVSHA VSGESPVAVA
EGGAVGSLFG DEFRMGEDFP TRVGIKVQDG CNNACTFCIV HVARGRAWSR PYKDVVAEAG
EYARRGVREI VLTGINLGAY RTEDADLVRL LDGLLEAAPN TRFRLSSVEP HTLSDDFIGL
MAASDGRICR HLHLPLQSGS TKVLKEMARP YTAQDFMGLV DRMYEAVPSL SLSTDVIVGF
PGETERDFQD TCDVARACRF SKMHIFRYSM RAGTPAALRS DQISPEVKAE RAAKLDAIEH
ELCAQDLARR KGTCELALVE TDGIATTESY HSVAAPVQSQ VGDLVPYIF
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