Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_10320 |
Symbol | |
ID | 8394923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1176720 |
End bp | 1177730 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644985790 |
Product | heat shock gene repressor HrcA |
Protein accession | YP_003143416 |
Protein GI | 257063744 |
COG category | [K] Transcription |
COG ID | [COG1420] Transcriptional regulator of heat shock gene |
TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.319867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000169449 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCTTTCGG AACGTAGGCA GCGTGTGCTC GAAGCGCTTA TCGAAGAGTA CGTGGCCTTT GCCCAGCCTG TCGGATCCCG CACCCTGGTC GACCGCTATA AGCTCGGGGT TTCTCCCGCT ACGGTCAGAA ACGAGCTATC GGTTCTGGAA GACGAAGGCT ACATCCGTTC GCCCCACACC TCCGCGGGGC GTATTCCCAC CGATGCGGGC TACCGCGCGT TCGTCGATGA GCTGCTCGAA CGCGAATACG GCACCGATGT AGACGGCTCC ACCTTCGACG AGCTGCGTTC GGCGGCCACG GCGGTGGACG AGCTTATGGA CCAGACGTCC GCGGCGCTGT CGCGGCTGAC GGACTGCCTG TCGGTGGTGC TTGCGCCATC GGTCATCGGT GTGTCGGTCA AGCAGGTGTC CTTGGTGTCC ATGACGCCGC ATCGCGTTTT GGTGGTCGTC GTGACCGACG ACGGGCAGGT GTTCAACCGC ACGGTCGAGT TCAACGAGGA GATTCCCTCC GACGAGCTGG CCCACCTGCA GAATGCCATA AACGGCCTTG TGAACGGAGC GAACGTTTCC GACATGCGCA AACGCATGTC CCAGGTCGAC TCCGAAACGC TTGCATCGCC TTTGGCCCAC GCCATTATCG AGGAGATCAT CCTCTGTATC AACCAAGGCG ACGCGTCCCG AACCCATCGT CTGGGGCTCT CGTCGCTGCT CCGCAAACCC GAATTCAGCC ACGCCCAGAC GGCCTTGCCC GTCTTGCAGG TGTTGGAGGA CGACACGGTG CTCATGCAGA TGTTCGACCG GGCTCTTGCC GACACCGCCA AGGAAGACCT CAAGGTCAGC ATCGGCCGCG AGAACGGTAC GGAGGAGCTC TCCGGCGTAT CGGTGGTCGC AGCCCAGTAC GGCACGGGTG CCGGCAGTGG CATCGTCGCC GTCATCGGGC CCACGCGCAT GGATTATTCA ACTGTCATAC ACGCTGTGCG CGCTGCGAAA AACGCGCTGC GTGATTTGTA G
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Protein sequence | MLSERRQRVL EALIEEYVAF AQPVGSRTLV DRYKLGVSPA TVRNELSVLE DEGYIRSPHT SAGRIPTDAG YRAFVDELLE REYGTDVDGS TFDELRSAAT AVDELMDQTS AALSRLTDCL SVVLAPSVIG VSVKQVSLVS MTPHRVLVVV VTDDGQVFNR TVEFNEEIPS DELAHLQNAI NGLVNGANVS DMRKRMSQVD SETLASPLAH AIIEEIILCI NQGDASRTHR LGLSSLLRKP EFSHAQTALP VLQVLEDDTV LMQMFDRALA DTAKEDLKVS IGRENGTEEL SGVSVVAAQY GTGAGSGIVA VIGPTRMDYS TVIHAVRAAK NALRDL
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