| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_10250 |
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| Symbol | |
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| ID | 8394916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1167892 |
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| End bp | 1170096 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644985783 |
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| Product | DNA internalization-related competence protein ComEC/Rec2 |
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| Protein accession | YP_003143409 |
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| Protein GI | 257063737 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.215433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000811582 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGCAGACGA TATCTGCGTC TGAGGCGCGT GCTGCGGCAG GAGTCGAGCC CGGCTTCCAA
AAACCCTTCC TTCCTCCAAC CGCATATGTT GCGGCAGGGC TTTGGCTTGC AATCCTGGTC
GGATTGGGCT TGTACCTGTC ATGTCTGCAG GGTGAAGGCG TGCCTCAAGG CCTTTCGCCG
GGTGAGCGGA CCTTCACGCT TGAGCAGGAC GCCAAACGGA CCGAGTTCGG ATGGCATGCC
GTGGCCACGG TCCGAGACGA TGCGGGCAAA AGCCGCCGGG TGCAGGTGTC CTTTGACGAT
TGCGAGCGGT TTCTGGCTCG GGACAAGGTG GTCTCCTACG CGTTGTTCTC GGAGTTCGAA
CCCGACCGCG AGATGCGCTA CCTCCAGCAA GGCGTGTGCG CCCGAGCGCG CCTGACCAGG
CCCGACCGAT GCGAACGCAC AGGGTTGACG GGTACGATGC TTTCGGTCCG AGCTTGGTGC
ATGGACCGGA TCGAAGCCCG AGACGGCAAA GGTTCGGCTC TGCTCGCGGC CGTGCTTCTG
GGGGATCGGC TGCGGCTTGA AGAGGGCGGC CTCTACGACG ACATGAAAGC CGTGGGCATG
GCCCACATGG TGGCGGTGTC GGGGGCGCAC CTGTCGGTGG TTTCGGCCTT CGTGATGATG
GTCCTGAAGC GGATCGGCAT GCCGAAAAGG GCGGTCGTCT GCGTCATCAT GGGATTCTTT
GCGGCATATG CCCTGTTCAC GGGGATGTCC ATACCGGTGC TTCGGGCAGC GCTCATGTCA
TCGGTGCTCA TCGGGGCCGT CTGGGGCGGA AGGCGTGGCT CGCCTCTGGC GGCGCTTTCG
GTGTGCGTCT GCCTGCTGCT GGCTGCAAAC CCTTACAACG CCTTCTCGCT GTCGTTCCTG
CTCTCGGTGG GCTCGACGTT GGGAATCATC CTGTTCACAG GGCTTTTCGA GACGTGGCTT
GGCAAGGCTT TAGGCGGAAG GTTTCCCACG GTGTGCAACA CGGTGGCCTT GACCATGGCT
GCCAATCTGG TGATCTTTCC AGTGGTGGCA TCGGTATTCG CCCGGCTGCC CCTGCTATCG
CCCGTGGCGA ACCTGATTGC GGCGCCGGTG TTCTCGGTGC TGCTCATCGG GGGCCTGGCC
GCGCTCGCGC TGTGTGCGGC GGCGCCTCCC TTGGGGTCTT TGGCGCTTGC GGTGTGCGCA
GGTGCGGCGG ATTTGTTCTG TTCGATCATG CATGCGTTGG CCCAAGTACC CTATGCAAGC
CTGTTCAGCA GCTGGTCGGC GGGCGCTTCG ACGGCCGTTT CGGTGGCGCT CATGGCCCTC
ATATGGAGGG TTTGGCCCAA CCCCCGTGCG AAAACGGTTC GCCGCGCGCT GTGCGCTGCG
GCTGCGGCGC TGCTCGTGTT CTTGCTTGTC GCCCCTCACA TGGCCGGGGA CGAGATCGTC
ATGCTGGACG TAGGGCAGGG GGACGCCTTC CTCATCCGTA GCCAGGGGAG GACGCTTCTG
GTGGACACGG GCAACCAGGA GACCATGCTG TCCCAGGCGC TTGCACGGCA TGGGGCCAAC
CGGCTGGACG CGTTGCTGGT GTCCCACCAC GATGATGACC ACTACGGTTC GCTTCCCGTC
TTGAAATCCG CCCTTGCCGG CGGTAAGGTG TACGTGGCCC GCGAGACCTT CACGACGGAG
GACAGGAACA ACGACCTGCT TCTGGAAGCC GCCAAGCAGA CGGTGGGCGC CGACGATGTG
CGCGGCCTGT CGTTCGGCGA CGTGCTGCAG GTGGGGCGGT TCACCTGCAC GGTCGTGTGG
CCCCATGCGT TTTGCGACAA GGGAGGCAAC GCCGACAGCC TGTGTCTGCG GGTGGAATAC
GACGGGGACG GCGACGGTTC CTGCGATTTC ACGGCGCTGT TCACAGGCGA CGCCGAAGCC
GACCAGATTT CCGCCATGGT GGAGGAGGGG ACCGTGGGAG ACATCGATGT GCTGAAAGAA
GGGCACCACG GCAGCCGCGC CGGTATGACG CCGGAGTTGG CGTCGGCGCT TCGGCCGGAA
GTGGTCCTGA TCAGCGTGGG TGCTGACAAC GATTACGGGC ATCCCGCGCC CGAGACTGTC
GAGACGCTGG AGGCTGCGGG CGCCCAGGTG TTCCGCACCG ATGAAAATGG AGATGTGTCT
TGCAGGTTCC GTGCCAACAC CCTCGAAGTG CGCGCAATGC GCTAG
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| Protein sequence | MQTISASEAR AAAGVEPGFQ KPFLPPTAYV AAGLWLAILV GLGLYLSCLQ GEGVPQGLSP
GERTFTLEQD AKRTEFGWHA VATVRDDAGK SRRVQVSFDD CERFLARDKV VSYALFSEFE
PDREMRYLQQ GVCARARLTR PDRCERTGLT GTMLSVRAWC MDRIEARDGK GSALLAAVLL
GDRLRLEEGG LYDDMKAVGM AHMVAVSGAH LSVVSAFVMM VLKRIGMPKR AVVCVIMGFF
AAYALFTGMS IPVLRAALMS SVLIGAVWGG RRGSPLAALS VCVCLLLAAN PYNAFSLSFL
LSVGSTLGII LFTGLFETWL GKALGGRFPT VCNTVALTMA ANLVIFPVVA SVFARLPLLS
PVANLIAAPV FSVLLIGGLA ALALCAAAPP LGSLALAVCA GAADLFCSIM HALAQVPYAS
LFSSWSAGAS TAVSVALMAL IWRVWPNPRA KTVRRALCAA AAALLVFLLV APHMAGDEIV
MLDVGQGDAF LIRSQGRTLL VDTGNQETML SQALARHGAN RLDALLVSHH DDDHYGSLPV
LKSALAGGKV YVARETFTTE DRNNDLLLEA AKQTVGADDV RGLSFGDVLQ VGRFTCTVVW
PHAFCDKGGN ADSLCLRVEY DGDGDGSCDF TALFTGDAEA DQISAMVEEG TVGDIDVLKE
GHHGSRAGMT PELASALRPE VVLISVGADN DYGHPAPETV ETLEAAGAQV FRTDENGDVS
CRFRANTLEV RAMR
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