| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08830 |
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| Symbol | |
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| ID | 8394774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1023608 |
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| End bp | 1025077 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644985643 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_003143279 |
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| Protein GI | 257063607 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000200273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGACGCTG GATACATCGA CGGCTGCAAG GCTGCACCTG TACACATCGG CAACGTGCTG
GTGCTCGGCC TGGGCAAGAG CGGACGTGCT GTAAGCGAAT ACTGCTTGGG ACTTATCGGC
ACGCGAATCG ACAACCTGGT CATCGCGGCG GGCGAGCAAA ACGAATCCGC CGCTACGTTC
GCCCGCGAGT GCGAACGTCG TGGCGCCACG GTCGTGTTCG ACACCTACGT GTTCGAGGGA
TCCTACGACC TGTGCATCGC GAGCCCCGGC ATCTCCCAGT TCTCCCGTTT CTACGAGAAC
GCTGCGGCAT GCTCCGCCGA GGTCATCAGC GAGGTTGAGT TCGCATGGCG CGAAAGTCGC
TCCGAATCCG TATGGATCGC CATCACCGGA ACCAACGGCA AGACCACCAC GACCACGTTG
ACCTATGAGA TTCTGAAGGC CGCAGGGCTG CCCGTGGCGG CCGTAGGCAA CATCGGCAAC
ACCTGCATCG AGGCCGTGGC GGAAGACCAG GCGACGTATT ACGTGGCCGA GGTGAGCTCC
TTCCAGCTGG CGTCCATGAG CAAATTCGCT CCCGACGTGG CGGTTCTGCT CAACATCACG
CCTGATCACC TGTACTGGCA CATGACTTTC GAAGCTTACG TGGACGCGAA GAAGAGCGTC
TATTCCCGTA TGAAGCAGGG CGTCGTGGTG ATCGACGCAG TCAACGACAT CGCCCGCAGC
TGCGTCAAAG AGTTCAAGAA CGACCCCGAC CGCGGCTTCT CCTACATCCC CATCGGCTGT
GCGGCCGGCC TCGACCACAG CATGGCCGAG GCGTGCGGAT CCGAGAACGC GGCGTACATG
CGCGGCGACG ACCTGCTCAT TAAGCGCGGC GACGAGGTCA TAGACCTGCT GAACTTCAAA
GAGCTGAACA TCAAGGGCGG ACACAACGCA TCCAACGCGC TGGCCGCCGC ATGCGCGGCC
CTGTCCGTGG GCGTCTCGGT TCCCGATGTG CGCCGTGCGC TGCGCGCGTT CAAGCCGCTG
GAGCATCGCA TGGAACCCTG CGGATCCATC GACGGCGTGA ATTTCATCAA CGACTCCAAA
GCGACCAACG TCGACGCGAC CTTGAAGGCC CTGGACTCCT TCGAGTCGGG CAAGGCCGTG
TTCCTGCTGG GCGGCCACGA CAAGGGAACC GACCTGGCGG AACTGGCCGC GAAGGCGGCT
GCGAACTGCA AGGCGGTCGT CTGCTTCGGC GCCGCCGGCA AGCGCTTCTA CAACGCGTTC
GATGACATGA AGGATGCGAA GGTCAAGCGC CTGCTTACCG ATCATATGGA AGACGCCTTG
GACGCCGCCA TCTCCATCTG CGAGCCCGGC GATTCCGTGG TCCTTTCTCC CGCTTGCGCG
TCGTTCGACG AGTTCGACTC GTTCGAACAC CGCGGCAGGG TGTTCAAGCA CCTGGTCGCC
TTCCGCGCCT ACTCCAAGAA AGGCGAGTAG
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| Protein sequence | MDAGYIDGCK AAPVHIGNVL VLGLGKSGRA VSEYCLGLIG TRIDNLVIAA GEQNESAATF
ARECERRGAT VVFDTYVFEG SYDLCIASPG ISQFSRFYEN AAACSAEVIS EVEFAWRESR
SESVWIAITG TNGKTTTTTL TYEILKAAGL PVAAVGNIGN TCIEAVAEDQ ATYYVAEVSS
FQLASMSKFA PDVAVLLNIT PDHLYWHMTF EAYVDAKKSV YSRMKQGVVV IDAVNDIARS
CVKEFKNDPD RGFSYIPIGC AAGLDHSMAE ACGSENAAYM RGDDLLIKRG DEVIDLLNFK
ELNIKGGHNA SNALAAACAA LSVGVSVPDV RRALRAFKPL EHRMEPCGSI DGVNFINDSK
ATNVDATLKA LDSFESGKAV FLLGGHDKGT DLAELAAKAA ANCKAVVCFG AAGKRFYNAF
DDMKDAKVKR LLTDHMEDAL DAAISICEPG DSVVLSPACA SFDEFDSFEH RGRVFKHLVA
FRAYSKKGE
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