| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08810 |
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| Symbol | |
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| ID | 8394772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1021069 |
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| End bp | 1022445 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644985641 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_003143277 |
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| Protein GI | 257063605 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000151314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCTGGTGG AACAGACCGG CGAAGTGTGC GATCTTACGG GACTGAGCTG GGATTCTCGC
ACCGTTCAAC CCGGGTATGT CTACGCCGCC CTGCCTGGGC AGCGCGTGGA CGGCCACGAC
TTCCTTCCTC AGGCGTTTTC TGCGGGCGCA GCATTGGCAT TGGTCAGCCG CGATCTGACG
GAATCAGAGT CGGAGGCGGC CCGTGCGGCG CATGCCGCCG TCGTCAAGGT TGACGATGTG
GCCCGGGCGA TTTCCGATTT GGCTGCGGCC TGGCGCGATG TGCTGAAGGC CGAGATCGTA
GGCGTGACCG GATCGGTGGG CAAGACCACC ACCCGCAGCC TCATCTACGG GGTGCTGGCG
TCGGCCTTCG AAGCCGACTG CACGAAAGGC AACTTCAACA ACGAGCTGGG CATGCCCTAC
ACGCTGCTGC AGACGGAGCC GTCCTGCGAG GTGCTGGTGC TGGAAATGGG TATGGACGGC
CTGGGGCAGA TCGCCGATCT GGCCCGCATC GCCCGTCCGA AGTACGGCGT CATCACCAAC
GTGGGCGTGT CCCACTTGGA GCGCCTGGGC ACCCGCGACA ACATCGCCCG CGCTAAGGCG
GAAATGGTGG AGGGTCTGCC CGATGGGGAA GGCGTGGCCT TCCTGCAGGC CGACGGCGAA
TATACGGATT TCATCATCGA GCATGCCCGC GCCGTCGAGC GCGGCATCCG CATCGTTCGC
TTCGACGGAA CCGCCGAGAA CTCCGATGTA TACGCCACGG ACATCGCCGT GGACGACCAG
GGCCGTCCGT CTTTCACGCT CAACGCCCGG GGCGAATCCG CGTCCTGCAC GCTTTCCGTC
CGCGGCGTCC ACAATGTGAC CAACGCCTGC GCCGCAGCTG CGGTGGGGCT TGAGTTTGGC
ATCGCGCTTG ACCAGGTGGC TGCTGCGCTT TCCGGCGTAG AGCCCGAATC GGGGCGCCAG
GCCCTCAAGC GTTCGAGCCG CGGCTTCCTC GTATTCGACG ACGCCTACAA CGCCAGCCCC
GAAAGCATGG CCGCCGCGTT GAATGTGCTC GCGTCGTTTT CTGCTTCAGG CAGGCGCATC
GCCGTGCTTG GGGACATGGG CGAGCTGGGA TCGGCCGAGG TCGAAGGGCA TATCAATACC
GGAAAGGCTG CCGCGCAGGC TGGCATCGAC ATGCTGGTGT GTGTGGGGGC TATGTCGCGA
TACATCGCTG ACGCTGCCCG CAAGGGCGGT ATGGCGGTAA AATCGGTTAT CGAAGTTGCC
GATGCCGATG CCGCAGCGAC CACGGTGCTC GACATTGCGC AGCCCGGGGA TGTGGTGCTG
GTCAAAGCGT CGCATTTCAT GGGGCTCGAT CGTGTTGTTG AAAGGGTTGT TTCCTGA
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| Protein sequence | MLVEQTGEVC DLTGLSWDSR TVQPGYVYAA LPGQRVDGHD FLPQAFSAGA ALALVSRDLT
ESESEAARAA HAAVVKVDDV ARAISDLAAA WRDVLKAEIV GVTGSVGKTT TRSLIYGVLA
SAFEADCTKG NFNNELGMPY TLLQTEPSCE VLVLEMGMDG LGQIADLARI ARPKYGVITN
VGVSHLERLG TRDNIARAKA EMVEGLPDGE GVAFLQADGE YTDFIIEHAR AVERGIRIVR
FDGTAENSDV YATDIAVDDQ GRPSFTLNAR GESASCTLSV RGVHNVTNAC AAAAVGLEFG
IALDQVAAAL SGVEPESGRQ ALKRSSRGFL VFDDAYNASP ESMAAALNVL ASFSASGRRI
AVLGDMGELG SAEVEGHINT GKAAAQAGID MLVCVGAMSR YIADAARKGG MAVKSVIEVA
DADAAATTVL DIAQPGDVVL VKASHFMGLD RVVERVVS
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