Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_08560 |
Symbol | |
ID | 8394747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1000701 |
End bp | 1001489 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644985616 |
Product | hypothetical protein |
Protein accession | YP_003143256 |
Protein GI | 257063584 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000399194 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGGAAGCG TAACGGGTGT TTATCCAAAA AGCCGGATGG ATGATTACTC ATGGGATGAA CTGGCGCGAA TCGCTAGGGT GATGTCTGCC GCTGGTGGCA AGTGGCGGGG AATCGAGGTT GCGAAAGAGT ACAACTTGTG TACACCGAGC GGCTCGCTTA ATGGTGCTCA GAAAAAGACC TTGAGGTTAA AAAACGGCCT GTGTACGGAT GCCGTGATTA TCGGTCTTAT GCACGATAAA CGTGCGTATT CTGACGACCT TGCAGGCATC TCCTTCCAGA CCGTTAATTG CGTAACGTTT GTTCCCATGA ACAGTTATGG AGGCAATAGG TACGGTTGGC AAGGGTCTGA TTTGAGGCAT TGGCTCAACT CTGAATTTCT ACGTTTCCTG CCCGACGACT TATCAAGAAG TATCATCCCT GTCGAAAAAC GGACCAACAA CAAAGGGAAG ACGAATGGTT CAAGTGATGT AACGGAAACG AATGATCAGA TCTGGGTTCC GTCTCTTGTG GAGCTTGTAG GGCTGCTGGA TAGGGACAGC TTTCTTGACC ATGCCCGTTT TACTGCAGAC ATCTACAACG CAGAAGGAAA GCAATATGAG CTATACAAAT ACTACGATGT TGTCTTCGGG GGAGGCTGTA GCGAGATAAG CAAAGAATGG TGTTGGTGGG AACGGAGTTG CTTGCCGACG TACGACGATC TGTGGTGGGT TGTGAACAAG ATGGGATTCG TCGACCGGTC GAGGGACCCT GCGTCAAATG GCGGCGTTGC TCCGTGTTTT TGTTTGTGA
|
Protein sequence | MGSVTGVYPK SRMDDYSWDE LARIARVMSA AGGKWRGIEV AKEYNLCTPS GSLNGAQKKT LRLKNGLCTD AVIIGLMHDK RAYSDDLAGI SFQTVNCVTF VPMNSYGGNR YGWQGSDLRH WLNSEFLRFL PDDLSRSIIP VEKRTNNKGK TNGSSDVTET NDQIWVPSLV ELVGLLDRDS FLDHARFTAD IYNAEGKQYE LYKYYDVVFG GGCSEISKEW CWWERSCLPT YDDLWWVVNK MGFVDRSRDP ASNGGVAPCF CL
|
| |