| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_07860 |
|---|
| Symbol | |
|---|
| ID | 8394677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 910033 |
|---|
| End bp | 911157 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644985546 |
|---|
| Product | Xaa-Pro aminopeptidase |
|---|
| Protein accession | YP_003143191 |
|---|
| Protein GI | 257063519 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0006] Xaa-Pro aminopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00623606 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGAC TCGAACGCAT GCGTGCGCGC ATGGAACAGG ACGGCTGGAA GGACTTCTAC
GTCCGCGACA TTTCCAGTGT GAAATGGCTG ACGGGATTTG AAGGCGTCTT CGATTCCGAG
GCCGCCCATC TGGCCTTCGT CACCCCGAAT TCCGCCATCC TGCATACGGA TTCCCGCTAC
TCCGATGCGG CCGTTGCAGC CGCCGAGGGC ACCGACTGGA CCGTCGACGA TACTCGTGCC
ACGCACGCGA AGTGGGTGGC GGACGCCTTC GCAGCCCACC ATGAGCAGGC GGGCACGCAG
TCCGGTCGGG GCATCTGCGG ATTCGCTATC GAGGATTCCC TGAGCATCAA GGAGTACCGG
GCGTTGGAAT CCGCCTTTGC CGAAAAGGCT TGGAGTCCGC GTTTGGTGGA GACCGATCAG
GTGGTGGTGA AGCTTCGCGC CTGCAAGGAC GAGGCCGAGA TCGAACGTCT GCGTGCCGCG
CAGGCCATAA CCGATGCGGC CTTCGAGCAC ATAATCGGGT TCATGCGCGA AGGCATGACC
GAGCGCGAGG TGCAATTCGA GCTTGAGCAG ACCATGCGCA AGATGGGTGC GGAGGACCTG
GCGTTCTCGT CGATCATCGC GTCGGGCGCC AACGGGGCCT CGCCGCACAG CATCCCAGGC
GACAAGCGTC TGGAGGCAGG CGATCTGGTC GTCATGGACT TCGGGGCCAA GGCCAAAGGA
TACTGCTCGG ACATGACCCG TACGGTTGCC ATCGGATACG TGAGCGACGA GGCGAAGGCC
GTGGTGGACG CCGTTCGCAA GGCGAACGAG ACCGTGGAGG CCATGCTCAA GCCTGGCGTG
ACGGGCAAGG CCGCCCACGA ACTGGCGGAA TACGTGCTGG CGCAGCACGG GTTCGCCGGT
AAGATGGGCC ACGGCCTGGG CCATGGCGTG GGCATCGACA TCCATGAGCT GCCGGTGCTT
TCGCCCCGCA ACGAGGCGCC GCTTGAGGTC GGAAACGTCG TGACCGTGGA GCCTGGTGTG
TATCTGAGCG GCAAGATGGG GTGTCGTCTC GAGGACTTCG GAATCATAAC TCCTGATGGT
TTTGAGGTGT TTACGCAATC CACGCACGAA CTCGTTATAA TTTAG
|
|---|
| Protein sequence | MNRLERMRAR MEQDGWKDFY VRDISSVKWL TGFEGVFDSE AAHLAFVTPN SAILHTDSRY
SDAAVAAAEG TDWTVDDTRA THAKWVADAF AAHHEQAGTQ SGRGICGFAI EDSLSIKEYR
ALESAFAEKA WSPRLVETDQ VVVKLRACKD EAEIERLRAA QAITDAAFEH IIGFMREGMT
EREVQFELEQ TMRKMGAEDL AFSSIIASGA NGASPHSIPG DKRLEAGDLV VMDFGAKAKG
YCSDMTRTVA IGYVSDEAKA VVDAVRKANE TVEAMLKPGV TGKAAHELAE YVLAQHGFAG
KMGHGLGHGV GIDIHELPVL SPRNEAPLEV GNVVTVEPGV YLSGKMGCRL EDFGIITPDG
FEVFTQSTHE LVII
|
|---|
| |