Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_07710 |
Symbol | |
ID | 8394662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 893207 |
End bp | 893848 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644985531 |
Product | uracil-DNA glycosylase, family 4 |
Protein accession | YP_003143176 |
Protein GI | 257063504 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1573] Uracil-DNA glycosylase |
TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.240792 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATTC ATTACGACCA TTTCAAGACC ATCTCTCCGT TGGGTGACGA GACGTCCGAG CAGCTGCTGG GCATGATCGG CGATGCCGTG CGCGCATGTC GCAAGTGCTA CCTGTGCGAA GGGCGCACCA ACGCCGTTCC CGGGTTCGGC AACGCCGGCG CGCGCATCAT GCTGATCGGC GAGGCACCGG GCAAGAACGA GGACCTGCAG GGCAAGCCCT TCGTGGGCGC GGCCGGCAAC TACCTCACCG AGCTTCTGGG GTATGCGGGC CTCACGCGCG AAGAGGTATT CATCGCGAAC ATCCTGAAGT GCCGTCCGCC TTCGAACCGC AACCCGCAGC CCGACGAGAT CTTCGAGTGC ACGCCGTACC TGCGCGACCA GGTGCGCGCC ATCATGCCCG AATACATCGT GACCATGGGC AACTTCGCCA CGAAATTCAT CCTGCGCACG GACCGCGGCA TCACGGGCCT GCGCGGCAAC CTGCAAAAGA CCGGCCAGTT CAGCGTGCTG CCGGTGTTCC ATCCGGCGGC GGCCATCTAC GACCGCACGA AGCGCGAAGT GCTTGAAGCG GACTTCGTGT ATCTGGGCCG CCTTTTGGGC AATGTGCCGT GGGAAGGCGA CGCACCGAAC GACGGCCGAT AG
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Protein sequence | MTIHYDHFKT ISPLGDETSE QLLGMIGDAV RACRKCYLCE GRTNAVPGFG NAGARIMLIG EAPGKNEDLQ GKPFVGAAGN YLTELLGYAG LTREEVFIAN ILKCRPPSNR NPQPDEIFEC TPYLRDQVRA IMPEYIVTMG NFATKFILRT DRGITGLRGN LQKTGQFSVL PVFHPAAAIY DRTKREVLEA DFVYLGRLLG NVPWEGDAPN DGR
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