| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_07020 |
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| Symbol | |
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| ID | 8394594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 818645 |
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| End bp | 819448 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985464 |
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| Product | conserved hypothetical protein TIGR01033 |
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| Protein accession | YP_003143110 |
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| Protein GI | 257063438 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000405153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.306564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGGAC ATTCTAAGTG GGCGACCACC AAGCATCGTA AGGCGGCACA GGACGCGAAG
CGTTCCGCGC TGTTCAGCAA GCTTTCCCGT AACATCACCG TTGCGGCGAA GGAGGGTGGC
GACCCCAATC CCGAGAACAA CGCTTCTCTG GCTGCCGCCA TCGAAAAGGC AAAGGCGAAC
TCCCTGCCCA AGGACAAGAT CAAGACCGCT ATCGACAAGG CCTTCGGCAC CGGCAAGGAC
GCCGCGAGCT ACGAAACCCT GACCTACGAA GGTTACGGCC CGGCTGGCGT CGCCATCCTG
TGCCAGGCTC TGACCGACAA CCGCAACCGT ACTGCCGCCG ACGTGGGATC CGCGTTCCGT
CATGCCGGTC AGTCTCTGGC CACTCCGGGC AGCGTTGCGT ATCAGTTCGA GCGCAAGGGC
CAGATTGTGG TCTCCAAGGA AATCGAGACC GGTGACAAGA AGAACCCCAT CGCCGTCAAC
GGTGCCGCTG GTGACGAGGA CGAGTTCATG ATGGTTGTCG CCGAGGCAGG CGGAGATGAC
TACGAGGACG CCGAAGACGA ATGGATCGTC TACACGGCTG CAACGGACCT GATGGCCGTC
AAGAAGGGCC TCGAGGAGCA GGGCGTCCAG GTGAAGGGCG CCGAGCTCAC CATGATCCCC
ACCACCCCGA CCCAGGTCAG CGTCGAGGAT GCCAAGAAAG TCATGCGTCT TATCGACAGG
CTCGAAGAGC TTGAGGACCT CCAGAACGTG TATCACACCA TGGAGATGAC CGACGAGATC
GTCGCCGCTC TCGACGAAGA GTAA
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| Protein sequence | MSGHSKWATT KHRKAAQDAK RSALFSKLSR NITVAAKEGG DPNPENNASL AAAIEKAKAN
SLPKDKIKTA IDKAFGTGKD AASYETLTYE GYGPAGVAIL CQALTDNRNR TAADVGSAFR
HAGQSLATPG SVAYQFERKG QIVVSKEIET GDKKNPIAVN GAAGDEDEFM MVVAEAGGDD
YEDAEDEWIV YTAATDLMAV KKGLEEQGVQ VKGAELTMIP TTPTQVSVED AKKVMRLIDR
LEELEDLQNV YHTMEMTDEI VAALDEE
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