Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_06700 |
Symbol | |
ID | 8394562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 782009 |
End bp | 784117 |
Gene Length | 2109 bp |
Protein Length | 702 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644985432 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_003143078 |
Protein GI | 257063406 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01525] heavy metal translocating P-type ATPase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000434785 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTTCT CGATTCGTAC TGAGATTCCG GGGCGCATGC GTCTGAACCT GGCTGGTCCG GTTCCCGACA ACGACATCGA TTCGCTCATC ACCGTCACCA AATCGTGCAT GTATGTCACG AAGGTGACGG TGTATGCGCG TATTGGACAG CTCGCTGTCA ATTACGTGAA CGCCCCCGAC GCCCGCAAAA CCGTCATCGA TCACCTTCGC TCCATCGATG CCGAGAAGAT CGCTGCTGCC CGCGGGCAAT ACACCATGAC CTTGGCGCCC CGCGCCTCAA AACTGTTCTT CCAGCTGGCG AACGTCATCG GCGGATACGT CTTCCGCCGG TGGGTCCTTC CTGCCCCGCT GCGTGCGATA TGCACCGTCG TCTCGTTCTT GCCCTTCCTG AAGGCAGGCG TGGCGGAACT GGCGAACAGC CGCCTGACCG TCCCTGTACT GGACATGTCG GCCATTGCCA TTTCGTTCTT GAAGCGCGAC TTCAACACAG CTGGCTCCAC CATGCTTCTG CTGAACGTCG GCGAGATTCT AGAAGACTAC ACTCGAGCTT CGTCCGAGAA TGCGCTAATC AATTCGCTGC TCGACGTGCC TGAAAGCGCA CGGAAGGTCA TCGATGGGGA CGAAATGATC GTTCCGTCCA ACGAGCTTGC CGCAGGCGAC CTGGTTGTCG TGCGCACGGG ACAGTCCATC TGCGTCGATG GCGTCATCGA AGCGGGCGAA GGCGCCGTGA ACCAAGCCAG CCTTACGGGC GAACCTTTGG CAATCCGTCG GTCCGTCGGC GACGACGTGT ACGCAGGAAC CGCCGTTGAA GAGGGCGAGC TGTACATCCG CGTGCGTTCC GACACCAACC AAACAAGGCT GCGCAGCATC GTCACCATGG TCAATGCGGC CGACGACCTC AAGGCAGAGA GCCAGTCCCG CATGGAAGCC CTTGCCGACA AGATCGTCCC CTGGAATTTC CTGTTGGCAG GCCTGGTCGC CATTACCACG CGCAGCATCA TCAAGACGTC TGCCGCACTG ATGGTCGATT ATTCCTGCGC CTTGAAACTT ACTGGCTCCA TCGCCGTCAT GACCGCCATG AGCAACGCCG CCAAGGCAGG CGTCACCACC AAGGGAGCCA AGCACTTCGA AACCTTTGCA AACGCCGACA CCATCGTGTT CGACAAGACC GGCACACTGA CTGAAGCAGC ACCCAAACTG GCAAAGGTTG AATCTCTTGA TCCTGCATGG CCGGAGGAAG AGGTCCTGCG TCTGGCAGCC TGTCTCGAAG AGCACTTCCC GCATCCCGTA GCCCGAGCCG TGGTGCACGG TGCCATGGAG CGCAATCTGG AGCACCGCGA GCGCCATGCG GCCGTCGAGT ACATCGTCGC CCACGGCATC GCCTCCTCGC TTGACGGGCA CCGCGTCGTC ATCGGATCGC GTCATTTCGT CATCGAAGAC GAGCACGTCC CCATTTCCGA CGAGACAATC GCCTATCTGG AAGACACCTT CCATGGTCTG AGCCCCTTGT ACCTTGCGGT CAACCACAAG CTGGTCGGCG TACTAGGGGT CCAGGACCCC CTGAAAGCCG ATACGAGAAA GGCCATTCAG CAGCTGCGTG ACCTTGGGTT TAAGCATGTG GTCATGCTGA CGGGCGACGC CCAGAAAACC GCAGAACGCA TTGCCGCCGA AGCCGGCATC GACGAATTCC AGGCGAACAT GCTTCCCGAG GACAAGTTCG CTTACCTGGA GCGCCTAAAG GAAGAAGGAC GTGTGGTCGC CATGGTGGGC GATGGCGTGA ACGACTCCCC CGCCCTGTCC CGCGCCGACG TCGGCGTGGC CATGGGACAA GGCTCCGACA TCGCGAAAGA AGTCGCTGAC ATCGTTCTTT CCGGCTCTAA CCTCGACTCT CTGGTGATGC TTCGCCAGCT GAGCCAAGAA CTGATGAACC GCCTGAACGT ATCCTATGCC AGCACCATGA CCATCAATTC GGCACTGCTG GCCCTTGGCA TCCTGGGCGT CATTTCGCCT CAGTTGTCGT CGTTGCTGCA CAATGCATCG ACCGTGGCTA TGAGCCTACG AAACACCGCC GCGTACCTGC CCCAGCACGA GAAGGAGTTG GAGCTGTAA
|
Protein sequence | MDFSIRTEIP GRMRLNLAGP VPDNDIDSLI TVTKSCMYVT KVTVYARIGQ LAVNYVNAPD ARKTVIDHLR SIDAEKIAAA RGQYTMTLAP RASKLFFQLA NVIGGYVFRR WVLPAPLRAI CTVVSFLPFL KAGVAELANS RLTVPVLDMS AIAISFLKRD FNTAGSTMLL LNVGEILEDY TRASSENALI NSLLDVPESA RKVIDGDEMI VPSNELAAGD LVVVRTGQSI CVDGVIEAGE GAVNQASLTG EPLAIRRSVG DDVYAGTAVE EGELYIRVRS DTNQTRLRSI VTMVNAADDL KAESQSRMEA LADKIVPWNF LLAGLVAITT RSIIKTSAAL MVDYSCALKL TGSIAVMTAM SNAAKAGVTT KGAKHFETFA NADTIVFDKT GTLTEAAPKL AKVESLDPAW PEEEVLRLAA CLEEHFPHPV ARAVVHGAME RNLEHRERHA AVEYIVAHGI ASSLDGHRVV IGSRHFVIED EHVPISDETI AYLEDTFHGL SPLYLAVNHK LVGVLGVQDP LKADTRKAIQ QLRDLGFKHV VMLTGDAQKT AERIAAEAGI DEFQANMLPE DKFAYLERLK EEGRVVAMVG DGVNDSPALS RADVGVAMGQ GSDIAKEVAD IVLSGSNLDS LVMLRQLSQE LMNRLNVSYA STMTINSALL ALGILGVISP QLSSLLHNAS TVAMSLRNTA AYLPQHEKEL EL
|
| |