Gene Shel_06410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06410 
Symbol 
ID8394533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp747596 
End bp748270 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content60% 
IMG OID644985403 
Producthypothetical protein 
Protein accessionYP_003143049 
Protein GI257063377 
COG category[R] General function prediction only 
COG ID[COG2819] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.676624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGTA ATTGGGAATA CGTCGTTCAT CAGGCCGAAT GTGCCGATTC CGGCGCCCTG 
CTGTATTACG TGGATGCGCC GGAGCACACG TTGGAGCTTC GGCGGGAATT GGAGGGCCGA
CCCTTCACGA CGGTCCAACT GCTCGTGCCG GATTGGGACG AAACGTTGAC GCCTTGGCCT
GCGCCGAAGG TGTTCGCCCA GGCGGAACGT GATTTCGGCG GGGGAGCGCG GGCTACTCTC
GGCAAGCTGC TTGATTCCAT GCCGGAAATC GAGCGGGAGC TGGGGATTCA GCCCCGTACA
CGCCTGATCG GCGGCTACTC GCTTGCGGGG CTGTTCTCGC TGTGGACGTT CACGCAAGCG
GATGAGTTTG CGGGTTGCGC ATGCCTGTCC GGGTCGCTTT GGTATCACGG GTGGCTGACG
TATCTGGAAG AATCGGAGTT TCCTGCCGAC GGGCGCTTCG CGTATCTGTC CATCGGCAAG
CAGGAGCGGT TCACGTCCAA CGAGGCCATG CGCTCCGGCG AGGACTGCAT GGCGAAGTCG
GCCGACCTGC TGAGCTTGCG GGGTGTGCGG ACGACGTTCG AGGTGTTGCC CGGTTCGCAT
TTCAAAAAGG TCAATGCGCG TCTGAACACG GCTTTTGACG AACTTTCTTC ATTTGTGAAA
GCATCTTGTC AATAA
 
Protein sequence
MACNWEYVVH QAECADSGAL LYYVDAPEHT LELRRELEGR PFTTVQLLVP DWDETLTPWP 
APKVFAQAER DFGGGARATL GKLLDSMPEI ERELGIQPRT RLIGGYSLAG LFSLWTFTQA
DEFAGCACLS GSLWYHGWLT YLEESEFPAD GRFAYLSIGK QERFTSNEAM RSGEDCMAKS
ADLLSLRGVR TTFEVLPGSH FKKVNARLNT AFDELSSFVK ASCQ