| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_06270 |
|---|
| Symbol | |
|---|
| ID | 8394519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 732075 |
|---|
| End bp | 733610 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644985389 |
|---|
| Product | predicted dehydrogenase |
|---|
| Protein accession | YP_003143035 |
|---|
| Protein GI | 257063363 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0579] Predicted dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGACG TCGCCATCGT CGGGGCGGGA ATCGCGGGTG CTTCCTGCGC TCGGGAATTG
TCCCGGTACG CGCTGTCCGT CTTAGTCGTG GAGGCCGGAA GCGACGTGGC CCAGGGAGCC
ACGCGCGCGA ACAGCGGCAT CGTCCACGGA GGGTACGACC CAGTGCCCGG CACGCTCAAG
GCCCGGTACA ATGTCGAAGG CTCGCACATG TATCCCCAGC TCGCAGCCGA GCTCGGCTTC
AGCTTCAAGA ACAACGGTTC GCTGGTGGTG GCGTTTTCGG AAAGCGAGCG CCCCCATCTG
GAAGCGCTGA TGGAACGCGG CATCGCCAAC GGGGTTTCGG GGCTCTGCAT AGCCGAACGC
GACGAGCTGC ACGTCATGGA GCCGAACCTG TCCGAGGCGG CTGTGGCGGC GCTTGTCGTT
CCGACGGGCG GCATCGTGAA CCCGTACGGC GCGTGCCTGG CGCTTATGGA GAACGCAGTT
GAAAACGGCG TGGAACTGCA GCTTCTGACC CGAGTCGCAA ACATCGAGAA GCTGGACGGG
GCCTTCCGTC TGACCTGCGA GAAGCTGCCT TTGGTGCCCG ATGCCGAACA TCGCACGGGA
ATGGATGCGC CGACGCCGGA AGGCACCTGC TCGGTGGAGG CCCGCATCGT GATCAACGCA
GCGGGCGCCT TCAGTGGCGT GCTCAACGAC ATGGTGAGCG CCGAGCATTT CGAAATCACG
CCGCGCATCG GCGAGTATCA CCTGATGGAT ACGGAATTCG GCGGCGCCTT CAGCCATACT
GTGTTCCAGA CACCCACCGC CAACGGCAAA GGCGTGCTTA TCACGCCGAC CACCGGCGGA
AACCTTTTGG TGGGGCCGGA CGCTATCCGC CGCGAACGCC TGGACGACAC CGCTACCGAT
ACGGCCGGGC TTGAGGCGGT ACTTGCGGCG GCGCGCAAAA CCTGGCCTGA CCTGCCTCGG
GGGTTCATCA CCAATTTCGC GGGCACCCGT TCGTCGTGTC TTGAGCACCC CGATTTCATC
CTGGGCGAAC CGTCCGACGC GCCTGGGTTC TTCAACATCG GCGGATTCGA TTCGCCGGGT
TTGACGGCGG CACCTGCCGT AGGTCGTGAA TACGCGCGGG TCATCGCCGA GCGCCTGCAT
GCCGAACCAA ACCCCGATTT CAACCCGAAT CGCACGCCCG CACCTCGTTT CAACAGGGCG
GATAGGGCTG AACAGGCCCG TCTTGCGGCG GAGGACCCGG CTTTCGGACA CGTCGTCTGC
CGGTGCGAGT GCGTCACTGA GGGCGACATC GTGGCCGCGG TGCATTCGCC TGTGCCGGCG
CTGACCGCCG ACGCCGTCAA GTGGCGGACC CGGGCGGGTA TGGGCCGCTG CCAAGGCGGG
TTCTGTCTGC CGCAGGTGGC GAGCATCATC GCGCGGGAAC GCGGCATCGA CGCGACCGAT
GTGGCGAAAA GCGCGCCGGG CTCGTGGATT GCGTTGGGGC GTCGCGGTTG CGTGGCCGAT
TTGCCCCATG TCGTGCTGCC CGGGGAGGGG GAATAA
|
|---|
| Protein sequence | MYDVAIVGAG IAGASCAREL SRYALSVLVV EAGSDVAQGA TRANSGIVHG GYDPVPGTLK
ARYNVEGSHM YPQLAAELGF SFKNNGSLVV AFSESERPHL EALMERGIAN GVSGLCIAER
DELHVMEPNL SEAAVAALVV PTGGIVNPYG ACLALMENAV ENGVELQLLT RVANIEKLDG
AFRLTCEKLP LVPDAEHRTG MDAPTPEGTC SVEARIVINA AGAFSGVLND MVSAEHFEIT
PRIGEYHLMD TEFGGAFSHT VFQTPTANGK GVLITPTTGG NLLVGPDAIR RERLDDTATD
TAGLEAVLAA ARKTWPDLPR GFITNFAGTR SSCLEHPDFI LGEPSDAPGF FNIGGFDSPG
LTAAPAVGRE YARVIAERLH AEPNPDFNPN RTPAPRFNRA DRAEQARLAA EDPAFGHVVC
RCECVTEGDI VAAVHSPVPA LTADAVKWRT RAGMGRCQGG FCLPQVASII ARERGIDATD
VAKSAPGSWI ALGRRGCVAD LPHVVLPGEG E
|
|---|
| |