Gene Shel_06250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06250 
Symbol 
ID8394517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp729617 
End bp730387 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content66% 
IMG OID644985387 
Productpredicted transcriptional regulator 
Protein accessionYP_003143033 
Protein GI257063361 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTTG ATCGGGCGGG TTTCGGGAAA ACGATTCAGG CGCTGCGCAA ACATGCGTCG 
GTGACCCAGG GCGAAGTGGC GTCGCGGGTT GGCGTGACCG ACAAGGCCGT GTCGAAGTGG
GAGCGGGGAG AGGCTCTTCC CGCGGCGGAG TCCTTCGCCG CATTGGGCAA GGCCTTGAAC
GTGCCGGCCC TCGTGCTGTT CGAAGCCATG GAGCCTGAAT CGGAACAGGG GCAGGCCGCA
CGGGCTCTTC CGCAGGCGGC GTTGCTGTCG TTGGGCATCG AGCCGAAGGG GTTCGAGCAC
ACGAGGCTTC TGATCCGCCG GCCGTATACG GATACGCTGC AAAAGCTGTC CCGGACGCCC
CCGTTTTTGT TCGAGCGGCT GTATCTGCAG CCGTCCCATG CCGGCCGTCC GCTGCTCGTG
CGGCAGACGC AGAACGACAT CAGGCTCCAT GTGTACGCCG TCATGAAAGT GCAGGCCCAC
GTGTCGGAGG CGCACGTCAT CTCGCGGAGC CAGTATGACG ACCTGGTCTC GTTCGCCGAC
GAGAGCCTGG CGCCCTACGC CTCGCAGGTC TGGGTGTTCT CGCGCGGCGG CCAGATGGCG
GCCTGCGAGC TGTTCGAGTT CTTCCCCTAC ACGGCCGTGC TCACGGTGTT CCACGCGCCG
GGGGAGGAGC CCGTGATCCC GGCGCACATC AACGTCGTGC GACGGTTGGA GGAAGACCGG
CATTTCGACC CGCTGTACAT GGCCCGCGCC TTGGCCCAGG GCAAGCTGTA G
 
Protein sequence
MPVDRAGFGK TIQALRKHAS VTQGEVASRV GVTDKAVSKW ERGEALPAAE SFAALGKALN 
VPALVLFEAM EPESEQGQAA RALPQAALLS LGIEPKGFEH TRLLIRRPYT DTLQKLSRTP
PFLFERLYLQ PSHAGRPLLV RQTQNDIRLH VYAVMKVQAH VSEAHVISRS QYDDLVSFAD
ESLAPYASQV WVFSRGGQMA ACELFEFFPY TAVLTVFHAP GEEPVIPAHI NVVRRLEEDR
HFDPLYMARA LAQGKL