| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_05510 |
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| Symbol | |
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| ID | 8394443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 637054 |
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| End bp | 638664 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644985313 |
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| Product | SSS sodium solute transporter |
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| Protein accession | YP_003142959 |
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| Protein GI | 257063287 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACA GCGACGCAAT CATCGTATTT GCGATTCTGA TTTACTTCGT GGTGGTTCTG
ACCATCGGCT TCGTGTATGC GAAGCGTTCC AACTCGTCGA CCTCCGAGTA CTTCCTCGGC
GGCCGCAAGG TGGGCCCCTG GTTCACGGCC CTTTCCGCCG AAGCCTCGGA CATGTCGGGC
TACCTGCTCA TGGGTCTGCC CGGCCTGGCC TACTTCACGG GCGCGTCCGA CGTGGGCTGG
ACGGCCATCG GCTTGGCTCT GGGCACGTAC CTCAACTGGA AGTTCGTGGC CGAGCGCCTA
CGCCGGTACT CCGTGGTGGC AAACGACTCC ATCACCATCC CCGGGTTCTT CTCCAACCGC
TATCATGACG AAAAGAAGAC AATCGGTACC ATCGCCGCCG TCATCATCCT CGTTTTCTTC
AGCGTGTACT GCGGCAGCTG CTTTGTGACC TGCGGCCGCC TGTTCCACAC CCTGTTCGGT
CTGGACTACG CTTCCATGAT GGTCCTCGGC GCTCTCATCG TGTTCCTGTA CACCATGGTC
GGCGGATATC TGTCCGTCGT CGCCACCGAC TTCGTCCAGG GCTGCCTGAT GTTCTTCGCG
CTGGCCGTCG TGGTCATCGG CTCGATCACC ATGGCCGGCG GCCTCGAAAA CACCGTGGCC
TTCCTGAGCG ACATCCCCGG TTATCTGTCC ATGACCACCA TGGCCGTGCC GATGGTTGAC
GAGACCGGCA CGCAGATGGT CGAGAACGGA ATGCCGCTGT TCGACGAGCC CGCCACTTAC
GGTATCATCA CCATCATCTC CACCATGAGC TGGGGCCTTG GCTACTTCGG CATGCCGCAG
GTGCTCGTCC GCTTCATGGG CATCCGTTCT CAGCAGGAAA TCAAGACCTC TCGTCACATC
GCCGTGGTGT GGGTCGTCAT CTCCATGTTC TGCGCCGTCA TGATCGGACT GATCGGCCGC
TACATCATCC CCAGCGAGCT TCTGACCTCC TCTTCCGCCG AGACCATCTT CATCGTCCTG
TCCAAGATGA TGCTTCCCGC ATTCCTCTGC GGCATCGTGG TTTCCGGCAT TCTGGCTGCA
TCGATGTCCT CCGCTTCGTC GTACCTGCTG ATCACGGGAT CGTCCGTGGC CGAAAACATC
TACCGCGCGC TGTTCAAGAA GGACGCCACC GACGACCAGG TGCTCATCGT TTCCCGCATC
ACCCTGGCGC TGGTGCTCAT TTTCGGTATC GTCGTGGCAT GGGATTCCAA CTCCGTCATC
TTCACGGTCG TGTCCTATGC TTGGGCCGGC CTGGGCGCAT CCTTCGGCCC GCTGATGCTC
TTCAGCCTGT ATTGGCGCCG CACCAACAAA GCAGGTGCCA TCGCCGGCAT GCTGACCGGC
GCGGGCATGG TGCTCATCTG GCACAATCTG ATCAAGCCCA TCGGCGGCAT CTTCGGTATC
TACGAGCTGG GCCCCGCATT CCTGTGCGGC TGCATCGCCA TCGTAGTTGT CTCGCTTCTG
ACCAAAGAGC CTGATCAGAG CATCTACGAC GAGTTCGATC ACTACATGGA CAACGATATC
GAAGGCGAGC GCAACCTGGA ACTGGTTCTG GAAGGCGACG TCACCGCGTA G
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| Protein sequence | MQNSDAIIVF AILIYFVVVL TIGFVYAKRS NSSTSEYFLG GRKVGPWFTA LSAEASDMSG
YLLMGLPGLA YFTGASDVGW TAIGLALGTY LNWKFVAERL RRYSVVANDS ITIPGFFSNR
YHDEKKTIGT IAAVIILVFF SVYCGSCFVT CGRLFHTLFG LDYASMMVLG ALIVFLYTMV
GGYLSVVATD FVQGCLMFFA LAVVVIGSIT MAGGLENTVA FLSDIPGYLS MTTMAVPMVD
ETGTQMVENG MPLFDEPATY GIITIISTMS WGLGYFGMPQ VLVRFMGIRS QQEIKTSRHI
AVVWVVISMF CAVMIGLIGR YIIPSELLTS SSAETIFIVL SKMMLPAFLC GIVVSGILAA
SMSSASSYLL ITGSSVAENI YRALFKKDAT DDQVLIVSRI TLALVLIFGI VVAWDSNSVI
FTVVSYAWAG LGASFGPLML FSLYWRRTNK AGAIAGMLTG AGMVLIWHNL IKPIGGIFGI
YELGPAFLCG CIAIVVVSLL TKEPDQSIYD EFDHYMDNDI EGERNLELVL EGDVTA
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