| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_05240 |
|---|
| Symbol | |
|---|
| ID | 8394416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 611232 |
|---|
| End bp | 611924 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644985286 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003142932 |
|---|
| Protein GI | 257063260 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.894138 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAAG AATGCCTGAT CTGCAAGGCG CCGCTGGAAT ATCTCGAGGC CGACGAGCTG
ATGGAGTGCG CTATCTGCCA CAAGCAGGAA CCGAGCAAGA CCCGCTGCGT CGAGGGCCAT
TACGTGTGCA ACGAATGCCA TACCGCCGGG CTGGATTCCA TCGTCGGGGT GTGTTTGGAC
GAAACGTCGA AGAACCCCAT TGAGATTACG AACAGGATGA TGGCCCTGCC GTTCTGCCAT
ATGCATGGGC CCGAACACCA CGTCATGGTG GGTGCGGCGC TGCTGACGGC GTACCGCAAC
GCCGGCGGCG ATATCGACCT GCCGCAGGCT CTAGGGGAAA TCATGAGCCG CGGCCGGCGC
GTGCCTGGTG GCACCTGCGG GTTCTGGGGC GCGTGCGGTG CGGGCATCAG CTCCGGCATG
TTCGTGTCTA TAGTGACGAA ATCCACACCC CTGGCCGAAG AGCCTTACGT GCTGTGCCAT
CGAATGACGG CAAAATCGCT GGATGCCATA GCCGACATGG GCGGTCCGCG CTGCTGCAAG
CGGAATTCGT ACATAGCCAT CCAACAAGCC ATCGATTTCG CGAAAGAGCA GCTCGGGATT
GAAATGGAGT CGCAGAAGGT CGTTTGCGAG TACTCGCGGC AGAACAACCA GTGCATCGGG
AGGCGCTGCC CGTTCTCGAA GGCCAATGCG TAG
|
|---|
| Protein sequence | MKEECLICKA PLEYLEADEL MECAICHKQE PSKTRCVEGH YVCNECHTAG LDSIVGVCLD
ETSKNPIEIT NRMMALPFCH MHGPEHHVMV GAALLTAYRN AGGDIDLPQA LGEIMSRGRR
VPGGTCGFWG ACGAGISSGM FVSIVTKSTP LAEEPYVLCH RMTAKSLDAI ADMGGPRCCK
RNSYIAIQQA IDFAKEQLGI EMESQKVVCE YSRQNNQCIG RRCPFSKANA
|
|---|
| |