Gene Shel_05150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05150 
Symbol 
ID8394407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp603368 
End bp603739 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content57% 
IMG OID644985277 
Productpredicted membrane protein 
Protein accessionYP_003142923 
Protein GI257063251 
COG category[S] Function unknown 
COG ID[COG1950] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.946396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.523625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCA TCGTACGTTG GCTTGTTACC GCAATCGCGG TTGCCGCCGC CATTTGGATC 
GTGCCCGGCA TCTCCGTTGC GGCCACCACC GACACGCTGG TCGCCGTAGG CGTTCTGGCG
TTCGTGCTGT CACTTTTGAA CGTTTCCATC AAACCCATCA TGCAGTTTCT GGGCACCCCG
TTGACGCTGC TCACCTTGGG AATTTTCTCT ATCGTGATCA ATGCGCTGGT GCTCATGCTT
GCAGGCTGGC TGTCCAACGG CATGTTCGGC ATCGGAATCT ACATCAACTC GTTCGGCTCG
GCGTTCTTTG CAGCCATCGT CATCAGCATC GTGAGCGCCA TCGTCAACAG TGTGGCCGGC
CTCGACGAGT AG
 
Protein sequence
MSFIVRWLVT AIAVAAAIWI VPGISVAATT DTLVAVGVLA FVLSLLNVSI KPIMQFLGTP 
LTLLTLGIFS IVINALVLML AGWLSNGMFG IGIYINSFGS AFFAAIVISI VSAIVNSVAG
LDE