Gene Shel_04680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04680 
Symbol 
ID8394360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp553253 
End bp554335 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content61% 
IMG OID644985231 
Productphenylalanyl-tRNA synthetase, alpha subunit 
Protein accessionYP_003142877 
Protein GI257063205 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0917331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000223014 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCATTGA TCGATGAGCT ATCGCAGCTC AGGGCCGAGA CGCTTGCGGC CATTGAGAGC 
GCGGCTGACA CCGCAGCGCT CGATCAGGTC CGTATCGGCG TTCTGGGCAA GAAGGGCACG
CTTACGAGCT ACCTTCGCAG CATGGGCCAG GTTGCCAAAG AAGAGCGCGC TGTCGTCGGC
AAGACCGTCA ACGAAGTGCG TCAGACCATC GAGGCTGCTC TGGATGAGCA CAAGGCGATT
CTTGAGCGCA GCGAGCTTCT GGCCAAAATG GATTCCGAGG CCGTGGACAT CACGCTGCCC
GGCCGCGTCC AGCAGATGGG TACGCGCCAT CTGATCAACG GCATCATCGA CGAGGTTTCT
GAAATCTTCC TCGGCATGGG CTATTCCGTC GTTACCGGTC CTGAAGCCGA GACCGACTAC
TACAACTTCG AGGCCTTGAA CGCCCCGGCA GACCATCCGT CCCGCGGCAT GCAGGATACC
TTCTATCTGG TCGATCGCTC TGGCGACGTC TCCCGTGTTC GCGGCGAGTC CGGCATCCTG
CTGCGCTCCC AGACGTCGGG CGTGCAGGTG CATACCATGG AGGACCAGAA ACCGCCTATC
TACATCATCG CCCCTGGTAA GGTGTACCGT CGCGACGTTG CTGACCCGAG TCACCTTCCG
CAGTTCCATC AAATCGAAGG CCTGGTCGTG GACAAGGGCA TCACCTTCGG CGACTTGAAG
GGTACGCTCG AGTACTTCAC CAAGGCCGTC TTCGGCGAAG ACCGCAAGAC CCGCTTCCGC
GCGCACTATT TCCCGTTCAC CGAGCCTTCC GCCGAGGCTG ACGTTAGCTG TGGCGTATGC
GGCGGCACAG GGCACCTGCA TAATGGCGAA CGTTGCCGTA TGTGCAAGGG CACGGGCTGG
CTTGAGATCC TCGGCTGCGG CATGGTCGAC CCGAACGTCT ACGGATTCGT GGACATCGAT
CCCGAAGTGT ATTCGGGCTT CGCATTCGGT ATCGGCGTTG AGCGCATCGC CTGCCTCAAA
TACAACGTCC CCGACCTGCG TATGCTGCTC GACGGCGACA TGCGTTTCCT GCGTCAGTTC
TAG
 
Protein sequence
MALIDELSQL RAETLAAIES AADTAALDQV RIGVLGKKGT LTSYLRSMGQ VAKEERAVVG 
KTVNEVRQTI EAALDEHKAI LERSELLAKM DSEAVDITLP GRVQQMGTRH LINGIIDEVS
EIFLGMGYSV VTGPEAETDY YNFEALNAPA DHPSRGMQDT FYLVDRSGDV SRVRGESGIL
LRSQTSGVQV HTMEDQKPPI YIIAPGKVYR RDVADPSHLP QFHQIEGLVV DKGITFGDLK
GTLEYFTKAV FGEDRKTRFR AHYFPFTEPS AEADVSCGVC GGTGHLHNGE RCRMCKGTGW
LEILGCGMVD PNVYGFVDID PEVYSGFAFG IGVERIACLK YNVPDLRMLL DGDMRFLRQF