Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_04680 |
Symbol | |
ID | 8394360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 553253 |
End bp | 554335 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644985231 |
Product | phenylalanyl-tRNA synthetase, alpha subunit |
Protein accession | YP_003142877 |
Protein GI | 257063205 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0016] Phenylalanyl-tRNA synthetase alpha subunit |
TIGRFAM ID | [TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0917331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000223014 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCATTGA TCGATGAGCT ATCGCAGCTC AGGGCCGAGA CGCTTGCGGC CATTGAGAGC GCGGCTGACA CCGCAGCGCT CGATCAGGTC CGTATCGGCG TTCTGGGCAA GAAGGGCACG CTTACGAGCT ACCTTCGCAG CATGGGCCAG GTTGCCAAAG AAGAGCGCGC TGTCGTCGGC AAGACCGTCA ACGAAGTGCG TCAGACCATC GAGGCTGCTC TGGATGAGCA CAAGGCGATT CTTGAGCGCA GCGAGCTTCT GGCCAAAATG GATTCCGAGG CCGTGGACAT CACGCTGCCC GGCCGCGTCC AGCAGATGGG TACGCGCCAT CTGATCAACG GCATCATCGA CGAGGTTTCT GAAATCTTCC TCGGCATGGG CTATTCCGTC GTTACCGGTC CTGAAGCCGA GACCGACTAC TACAACTTCG AGGCCTTGAA CGCCCCGGCA GACCATCCGT CCCGCGGCAT GCAGGATACC TTCTATCTGG TCGATCGCTC TGGCGACGTC TCCCGTGTTC GCGGCGAGTC CGGCATCCTG CTGCGCTCCC AGACGTCGGG CGTGCAGGTG CATACCATGG AGGACCAGAA ACCGCCTATC TACATCATCG CCCCTGGTAA GGTGTACCGT CGCGACGTTG CTGACCCGAG TCACCTTCCG CAGTTCCATC AAATCGAAGG CCTGGTCGTG GACAAGGGCA TCACCTTCGG CGACTTGAAG GGTACGCTCG AGTACTTCAC CAAGGCCGTC TTCGGCGAAG ACCGCAAGAC CCGCTTCCGC GCGCACTATT TCCCGTTCAC CGAGCCTTCC GCCGAGGCTG ACGTTAGCTG TGGCGTATGC GGCGGCACAG GGCACCTGCA TAATGGCGAA CGTTGCCGTA TGTGCAAGGG CACGGGCTGG CTTGAGATCC TCGGCTGCGG CATGGTCGAC CCGAACGTCT ACGGATTCGT GGACATCGAT CCCGAAGTGT ATTCGGGCTT CGCATTCGGT ATCGGCGTTG AGCGCATCGC CTGCCTCAAA TACAACGTCC CCGACCTGCG TATGCTGCTC GACGGCGACA TGCGTTTCCT GCGTCAGTTC TAG
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Protein sequence | MALIDELSQL RAETLAAIES AADTAALDQV RIGVLGKKGT LTSYLRSMGQ VAKEERAVVG KTVNEVRQTI EAALDEHKAI LERSELLAKM DSEAVDITLP GRVQQMGTRH LINGIIDEVS EIFLGMGYSV VTGPEAETDY YNFEALNAPA DHPSRGMQDT FYLVDRSGDV SRVRGESGIL LRSQTSGVQV HTMEDQKPPI YIIAPGKVYR RDVADPSHLP QFHQIEGLVV DKGITFGDLK GTLEYFTKAV FGEDRKTRFR AHYFPFTEPS AEADVSCGVC GGTGHLHNGE RCRMCKGTGW LEILGCGMVD PNVYGFVDID PEVYSGFAFG IGVERIACLK YNVPDLRMLL DGDMRFLRQF
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