Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_04300 |
Symbol | |
ID | 8394322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 513257 |
End bp | 513961 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644985194 |
Product | Ferric reductase like transmembrane component |
Protein accession | YP_003142840 |
Protein GI | 257063168 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00128485 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0690521 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTCG CAATCACGAT TGTCGTCACG GCGGTTGCGG CCGTTCTGCT GGCGCCGTCG ATTCGCAAGG CGCCCGCCGC ATGGTACGCC GGGGCCGTCG CCGTGTGCGT GATCTGCGCG TATCTGATGC TGCATCCCAT GCCCTATCAA GTGTTGCGCG CGTTCGCTTT TGCAGTGCAG AAGTGCTATG TGGCATTCGG CCTGTTCGCC GTGGTCATGT TCGTGGGCGC CGCTCCCAAA ACCTCGGTGT TCTTCCACCG TGTCATGCCG GCTCGTGCCG AACTGTCCAT CGTGGCCACA CTCCTTTCGG GCGGACACAT CGTGCTGTAT ACCATGAATT ATCTGAGCAC GGGTTCGGCT CTGTTCTCGA CGCCGAAGAT GCTCGTGCCG TTTGCTATGT CCGTCATCGC AGCGGTGGTG CTCGTCGTGC TGTTCGCCAC ATCTTTCAAG CGCGTGCGCG TCACCATGCC GTTCAACCGT TGGAAATTCA TCCAGCGATT CGCATACCTT TTCTTCGCGC TGATCATCGT GCATGCACTG CTGTTCCTGG GGCCGTCGGC CCTGAACGGG TCCGTGCATG CAGCGACCAA TCTGGCCGTG TACGTGCTTG TGGGTGCTGC GTATGCGGTC GCGCGCATCG CCCGCTATAT GTCCGACAGG AAGAAGGCTT CCAAGCCGGA AACCCTCGAG GACCTTTGTC GTTAG
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Protein sequence | MELAITIVVT AVAAVLLAPS IRKAPAAWYA GAVAVCVICA YLMLHPMPYQ VLRAFAFAVQ KCYVAFGLFA VVMFVGAAPK TSVFFHRVMP ARAELSIVAT LLSGGHIVLY TMNYLSTGSA LFSTPKMLVP FAMSVIAAVV LVVLFATSFK RVRVTMPFNR WKFIQRFAYL FFALIIVHAL LFLGPSALNG SVHAATNLAV YVLVGAAYAV ARIARYMSDR KKASKPETLE DLCR
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