Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_02530 |
Symbol | |
ID | 8394145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 307161 |
End bp | 308294 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644985024 |
Product | glucan-binding domain-containing protein |
Protein accession | YP_003142670 |
Protein GI | 257062998 |
COG category | [R] General function prediction only |
COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.459016 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0379723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAC TGATTATGCT GCCCTTTACA GCAGCGATTG CACTTGCGTG CGCAACGGGT TTCGCCTATG CCGAAGAGGC CGTCGAACAG GAGGTGGCGG CCGACGACAT TGTTGCGTCT GAGCAGGGCC TCGTCGAGCA AAACGCCGTC GAAGAGGCCG ACGAGGCGGT CGTTGCCCAG GAGGCCGCCG CCGATGAAGC GGACGATGCC GTGCAGCCCC TTTCGAACAC GTTTGACGGA TGCAGCTTCT ACGTGGAGGG AGGTCCCTTC TACTTTACGG GAAATCCGGA GACTCCCATC ATCTCTGTCG AGGGCCCTGG TGGCGAGGAG CTCGTAAACG GGAAAGACTT CGAGGTTGAG TACTCGATGG ACCTGGGTCC TGGCGACGTG TATTACAGGG TCATCGGCCT CGGCTCCTAT GAGGGCGCCA GCTATGAAGG TTATTTCTAC GTCATTCCCA CCGGAACGTA TCCTTGGGAC GCGATAGAAC TAGAGAATGG CAAATGGCTG AAGAATTCCA AGGGCTGGTG GTATCGGTAT GATACCAGCG GGTGGGCCTG CGGCATATTC GCTTCCGAAA ACGGGAAGAT CTACTACTTC AACGATGCCG GGTATATGGT TACGGGGTGG CAGACCCTCA ACTACTCAGG TAACGACTAC ATGATCCTCG AAGGCGGCGA TATCTATTTC GCGAGCAACG GCGCCATGCA GTTCAGATGG TCGAAGATCG GCGGTAAATG GTTCTACTTC GATTGGCCGA CGGGCGTCGT GCAATACGAT TGGCTGCGGA TTGACTCCAA CTGGTATTAC ATCGATTACA ACAAGGGCAT GCTGACCGGA TGGTCGAAGA TCGGCGGCAA GTGGTATTAC TTCAACAAGT CGGGTGTCAT GAAGACCGGT TGGCTGAAAT CCGGTAGCAA TTGGTACTAC CTGAAGAGCT CCGGCGCCAT GGTCACCGGC TGGTACCAGG TCGGCTCGAA GTGGTATTAC TTCAACAGCA GCGGCGTGAT GCAGGCCAAC AAATGGGTAG GCAACTACTA TCTGACCAGT TCAGGTGCTA TGGCCACCAA TACATGGATC GGCAACTACT ACGTGGGCGC CGACGGCAAA TGGGTCAAGG GCAAGACGAA GTAG
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Protein sequence | MKRLIMLPFT AAIALACATG FAYAEEAVEQ EVAADDIVAS EQGLVEQNAV EEADEAVVAQ EAAADEADDA VQPLSNTFDG CSFYVEGGPF YFTGNPETPI ISVEGPGGEE LVNGKDFEVE YSMDLGPGDV YYRVIGLGSY EGASYEGYFY VIPTGTYPWD AIELENGKWL KNSKGWWYRY DTSGWACGIF ASENGKIYYF NDAGYMVTGW QTLNYSGNDY MILEGGDIYF ASNGAMQFRW SKIGGKWFYF DWPTGVVQYD WLRIDSNWYY IDYNKGMLTG WSKIGGKWYY FNKSGVMKTG WLKSGSNWYY LKSSGAMVTG WYQVGSKWYY FNSSGVMQAN KWVGNYYLTS SGAMATNTWI GNYYVGADGK WVKGKTK
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