Gene Shel_02500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02500 
Symbol 
ID8394142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp303014 
End bp303439 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content62% 
IMG OID644985021 
Producthypothetical protein 
Protein accessionYP_003142667 
Protein GI257062995 
COG category[S] Function unknown 
COG ID[COG3885] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.360289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.827686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATCG TTGCAGCGTA CGCCGTGCCC CACCCGCCGC TGATCATCCC TTCCGTCGGA 
TGCGGCCAAG AGGCGGGCAT CCAGGGCACC ATCGACGCAT ATCACCAGGT GGCAGTCCAC
ATTGCCGAGA CTGCACCCGA TACGGTCATC GTATCCAGCC CGCACGCGCC GGCATATCGC
GACGGGTTCG CAATCTGCCA GATGGAGCGG TTGGAAGGCA ACATGCGGCA GTTCCGGTCG
CCCGAACGCA TTGAGTGCAA CGTCGACGTT CAGCTGGCGC AAGCCATTGA GGCCGCGGCC
ATCGATGCCA GCATCTCCGT ATACGGCAGC GCATGGCGAA ACGCACCCAT GGACCACGCC
ACGTTCATCC CTCTGTACTT CCTCCGTGCA ACGAGAATCC GATTTCGTGC GCACTTGAGG
GGATAA
 
Protein sequence
MPIVAAYAVP HPPLIIPSVG CGQEAGIQGT IDAYHQVAVH IAETAPDTVI VSSPHAPAYR 
DGFAICQMER LEGNMRQFRS PERIECNVDV QLAQAIEAAA IDASISVYGS AWRNAPMDHA
TFIPLYFLRA TRIRFRAHLR G