Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_02360 |
Symbol | |
ID | 8394128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 286604 |
End bp | 287857 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644985007 |
Product | arginine deiminase |
Protein accession | YP_003142653 |
Protein GI | 257062981 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2235] Arginine deiminase |
TIGRFAM ID | [TIGR01078] arginine deiminase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0263165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGTA TTCACGTGAC AAGTGAAATC GGCAACCTGA GGAAGGTTTG CGTGCATCGC CCCGGCGATG AGCTGCTCAA CCTGCCTCCG GACTCCCTTG ACCGTCTTCT GTTCAACGAC GTCCCGTTCC TGGACGTCGC CCAGCAGGAG CATGATGCCT TCGTGGACAT GCTTCGTTCG CAGGGTGTCG AAGTCCTGTA TCTCGAGAAC CTGGTGGCCG AAACCTTCGA CGCATCGCCG AAGTTCCGCG CCCGGTTCCT TGATCAGTTC ATCGCCGAAG CCTCCATCAA AGGCGATCAG ATGGCCAAAG AGGTCCGTGC GTACCTGGAT TCGTTCGAGG ACAACCTGGC TCTGGTCAAA AAGACCATGG CGGGCATTAC CCGCAGCGAG CTGGACCTGC CCCGCACGTA CCCCTACACA ACGCTGCAGG ACATGGTAAA CGAGCACTTC AACCGCGATT CCGTACTGGT CGTCGACCCC ATGCCCAACC TGTGTTTCAT CCGCGACCCC TTCGCGTGCA TCGGCGAAAG CGTCACCGTC AACCGCATGC ACTCGCCGAT CCGCAACCGC GAATCGCTGT ACATGGAGCA CCTTTTCAGC TGTCATCCCG ATTTCGTGAA CACGCCGCAG CTGCTTAGCC GCACCGATCC GTACTCCATC GAGGGCGGCG ACGTGCTGAA CCTGACCCGC AAGTCGCTGG CCGTGGGCGT TTCGCAGCGC ACCGAACCTG CCGCCATCGA CCACATCGCC CGCAACGTGT TCTGGAATAC AGAAGGTTCC GAAATCGAGC GGATCTTCGC TTTCGAAATT CCGCCCTACT CGGAATTCAC CCACCTGGAC ACGGTGTTCA CCCAGATCGA CGTGGACAAA TACACGGTGC ATCCGGCCAT CCTGGGGTCT ATGCGCGTGT ACGAGATGTC GAAGGGTTCC CGCCCGGGCG AGGTGCGCAT CAAGCGCCAC GTCGACGCTC TGGAGCGCAT CCTGGAGTAC GCCACCGGCG TGGACGGCAT CAAGCTCATC CCCTGCGGTG GGCAGGACCG GCTGGCGTCG GTCCGCGAGC AGTGGAACGA CGGCACCAAC ACGCTGTGCA TCAAGCCCGG CACCATCTGC GTGTACCAGC GCAACAAGGT GACCAACGAC CTGCTGTACA AGGAGGGGCT GGAGCTTCTG GTGGTTCCCT CCGCAGAGCT GTCCCGCGGA CGCGGCGGCC CCCGATGCAT GAGCGCGGCA CTGCAGCGCG CAGACGTTTT GTAA
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Protein sequence | MTGIHVTSEI GNLRKVCVHR PGDELLNLPP DSLDRLLFND VPFLDVAQQE HDAFVDMLRS QGVEVLYLEN LVAETFDASP KFRARFLDQF IAEASIKGDQ MAKEVRAYLD SFEDNLALVK KTMAGITRSE LDLPRTYPYT TLQDMVNEHF NRDSVLVVDP MPNLCFIRDP FACIGESVTV NRMHSPIRNR ESLYMEHLFS CHPDFVNTPQ LLSRTDPYSI EGGDVLNLTR KSLAVGVSQR TEPAAIDHIA RNVFWNTEGS EIERIFAFEI PPYSEFTHLD TVFTQIDVDK YTVHPAILGS MRVYEMSKGS RPGEVRIKRH VDALERILEY ATGVDGIKLI PCGGQDRLAS VREQWNDGTN TLCIKPGTIC VYQRNKVTND LLYKEGLELL VVPSAELSRG RGGPRCMSAA LQRADVL
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