Gene Shel_02240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02240 
Symbol 
ID8394116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp273756 
End bp276101 
Gene Length2346 bp 
Protein Length781 aa 
Translation table11 
GC content66% 
IMG OID644984996 
Productribosomal-protein-alanine acetyltransferase 
Protein accessionYP_003142642 
Protein GI257062970 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family
[TIGR01575] ribosomal-protein-alanine acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCAT ACATTCTGGC ATTCGACACG GCCAACGAGG TCGTTGCGGT GGGCGTGGGC 
CGCCTGCCCG ACGATGCTGT CGACATAACC GCCGCTCAAG CCGAATGCGT CGCATCGGCG
TCGGTTTCGG CACGGCGGGC CAGCAACACC ACGCTTATCG CTCGCATCGA CGAGGCGCTG
GCGTCTGCCG GCGTGACGAA AGACCAGGTC GCAGCCGTGG TTTGCGGTCG CGGCCCTGGC
AGTTTCACGG GCGTGCGCAT TTGCATGGCC ACGGCCAAAG GCATGGCGTC CGCGTTGGAG
GTGCCGCTGT TGGGCGTGTC CACCCTGGAT GCCGTGGCGT GGCGCGCGTG GGCCGAAGGG
GTCCGCGGCG CACTGCTGGT GGTTGCCGAC GCCATGCGTA AAGAGGTGTA TCCGGTGCTG
TTTCGTCTGG ATGACGAAGG TGCGCAACGC CTGACCGCCG ACGCGGTGGT GAAGGTGCAC
GACGCCGAGC GCTGGATTGC CCAGGCGGTG CTGGAAACCT TCGGCGACCC CGCCACCGAG
TTGAAGATTG CAGGCGACGG CCTGATGAAA TACCGCGAAA CCTTCGAGGG TCTGGGCCAG
GTGCTGGACG AGGGCTTGTG GCCCGTGTCC GGCGAGGGTT TGCTGATGGC GCCTCGGATG
GGCGGTAACC CGGCCACGCT GCTGCCGGTG TACACGCGCC TGTCCGACGC GGAGGAGAAC
GAACGCATTC GACTGGCTGA CGCGGCTCGT GCGCCGAAAG ACCTGGCCAC GGGCGTGCAG
GCCGAAGGTG CCGTCACATA TCGGCCTCTG GACGCCGAGC ATGTGGGCGA TGTGGTCGAC
CTGGAACGAC GCACCATGGG AACCGATGCG TGGAACGCGA ATTTGGTGGC CGACGAACTG
CCCCGCAAGG ACCGCACCTG GTGGGCCGCC TTCGACGGAA CGCGGCTGGT GGGCTATTGC
GGCGGGTTGG TCGTCGCAGG CCAGGTTGAG ATTCTCAAGA TTTCCGTCGA GCCTGCGTAC
CGTCGTCGCG GCATTGCCCG GCATCTGCTG GGTCTGGTGG CCGCCGACGC ACGCGACCTG
GGCGCCTCGG AGTGCACGCT TGAGGTGCGC GTGTCCAACG AGGGCGCGCA GGCGTTCTAC
CGTGATCTGG GGCTGGAGCT TGTGGGCGTG CGCCCGGGCT ATTATAGCGA TCGGGAGGAC
GCCGCCATCA TGACCGGTCC GCTTCCCGTG GAGGTCCACG ACGTGGCGGG CATGACCCTG
CGTGTGGACG AGGTTGCCAA TGGGGAAGAA TCCGACGTTG TGGCTGTTCA ACCGCTGATT
CTGGCCATCG AGAGCTCCTG TGACGAGACC GCCGCGGCCA TTATCGACGG CGAAGGGTCC
ATGCTGTCCG ACGTGGTGGC GTCCCAGATC GATTTCCATG CGCGCTTCGG CGGCGTGGTT
CCGGAAATCG CCAGCCGCAA GCACATCGAG GCCATCTGCG GCGTGACCGA CGAGTGTCTG
GACGTGGCGG CCCGCGCGCT GGGCCGCAGC CGCCTGCGGT GGCGCGACTT GGATGCCGTC
GCCGTAACCT ACGCTCCGGG CCTGGTGGGA GCGCTGGTGG TAGGTGTCGC CTTCGCCAAG
GGTGCCGCAT GGGGCGCCGA TCTGCCCATT ATCGCCGTGA ACCACTTGGA GGGACATCTG
TATGCGAACC GCCTGGCCGA GCCGGACATC CAGCCTCCCA TGGTGGTGTC GCTGGTCAGC
GGCGGCCACA CCATGCTGGT CCATGTGAAG GATTGGGGCG ATTACGAAAC GCTGGGCTCG
ACCATCGACG ATGCGGTGGG CGAGGCCTTC GACAAGGTGT CCAAGGCGCT GGGGCTGGGT
TATCCTGGCG GTCCGATTAT CAGCAAATAC GCAGCTCAGG GCGATGCGAA GGCCATCGCG
TTCCCGCGTG CGCTCATGCA CTCGGGCGAT TTGCGGTTCA GCCTGTCTGG CCTGAAGACC
GCCGTGACCA CCTACATCAA CAAGGAGCGC GAGGCGGGGC GCGAACTGAA CATTCCCGAC
ATCGCAGCCA GTTTCGAGGC GGCGGTGGTC GATGTGCAGG TGTCGAAGGC GCACACGGCC
CTGAAGGACA CCGGCGCGCG CACGTTCTGC CTGGGCGGCG GCGTTGCGGC CAATCCCGCG
CTGCGCGGCG CCTACGAAGC CATGTGCAAG AAGCACGGGT ATCGCCTGGT CATGCCGCCG
CTTTCGGCCT GCGGAGACAA TGCGGCCATG ATCGCCGAAG TCGCCCGCGA CCGCTTCGCC
CAAGGCAAGT TCGCCGACTG GAGCCTGGAT GTGACGGCCC ACGCCCCCTT GGACGAGCCG
TACTAG
 
Protein sequence
MGAYILAFDT ANEVVAVGVG RLPDDAVDIT AAQAECVASA SVSARRASNT TLIARIDEAL 
ASAGVTKDQV AAVVCGRGPG SFTGVRICMA TAKGMASALE VPLLGVSTLD AVAWRAWAEG
VRGALLVVAD AMRKEVYPVL FRLDDEGAQR LTADAVVKVH DAERWIAQAV LETFGDPATE
LKIAGDGLMK YRETFEGLGQ VLDEGLWPVS GEGLLMAPRM GGNPATLLPV YTRLSDAEEN
ERIRLADAAR APKDLATGVQ AEGAVTYRPL DAEHVGDVVD LERRTMGTDA WNANLVADEL
PRKDRTWWAA FDGTRLVGYC GGLVVAGQVE ILKISVEPAY RRRGIARHLL GLVAADARDL
GASECTLEVR VSNEGAQAFY RDLGLELVGV RPGYYSDRED AAIMTGPLPV EVHDVAGMTL
RVDEVANGEE SDVVAVQPLI LAIESSCDET AAAIIDGEGS MLSDVVASQI DFHARFGGVV
PEIASRKHIE AICGVTDECL DVAARALGRS RLRWRDLDAV AVTYAPGLVG ALVVGVAFAK
GAAWGADLPI IAVNHLEGHL YANRLAEPDI QPPMVVSLVS GGHTMLVHVK DWGDYETLGS
TIDDAVGEAF DKVSKALGLG YPGGPIISKY AAQGDAKAIA FPRALMHSGD LRFSLSGLKT
AVTTYINKER EAGRELNIPD IAASFEAAVV DVQVSKAHTA LKDTGARTFC LGGGVAANPA
LRGAYEAMCK KHGYRLVMPP LSACGDNAAM IAEVARDRFA QGKFADWSLD VTAHAPLDEP
Y