| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_01750 |
|---|
| Symbol | |
|---|
| ID | 8394067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 216392 |
|---|
| End bp | 217840 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644984948 |
|---|
| Product | amidophosphoribosyltransferase |
|---|
| Protein accession | YP_003142595 |
|---|
| Protein GI | 257062923 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
|---|
| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.674101 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCACAT CGATTCTCCC AGGTGAAGCT CCGGACCGGC CCCAGGAGGA ATGCGCTGTA
TTCGGAGTGT TCTCACCTAC CGACGACGTG GCGCGCCTGA CCTGTTTCGG CCTGCAAGCG
CTGCAGCACC GCGGCCAGGA GAGCGCCGGC ATCGCCGTCG GCGACGGTGA GACGGTCACG
GTGATGAAAG ATCTCGGCCT GGTCACCCAG ATTTTCGACG AAGGTTCCTT GGCGGCGCTG
CAGGGCGACG TGGCCGTGGG ACATTGCCGT TACGCCACCA GCGGCATTAG CGACGCATGG
TTTTCGGCCC AGCCCCACAT GTCCGCCATC GACGAGGTCA TGGTGGCGCT GGCCCACAAC
GGCACGCTGG TCGACACCGA ACCCATCCGC GAGCGTCTGG AGGCCCGGGG CGTGGAGTTC
CGTGCCGGCA CCGACTCCGA GGTGGCCTGT CAAGCCATCG GCTACTACAC CCGCGAGACC
CACCATCTGA CCGAGGGCAT CAAGCAGACC ATGGAGCTTA TCAAGGGCGC CTACGCCATG
GTGCTTGCCA GCCCCACGGC CTTGTACGCG TTCCGCGACC CGAACGGCAT CCGCCCGCTG
TGCCTGGGCA AACTGCCCGG CGACCGCGGC TGGGTGGTTT CTTCCGAAAC CTGCGGCTTG
GACATCGTGG GCGCCGAATT CGTTCGGGAC GTGAACCCCG GCGAGATCAT CCGCATTAAC
AGCACGGGAA TTTCCACCTT GCAGGCTCTT GAGCCCGGTC CGTCGCGAGG CTGCATCTTC
GAGTACGTAT ACTTCGCCCG CCCCGACAGC GTGATTGACG GGCAAAGCGT CTACCAGGCA
CGACGCGCCA TGGGCCGCAT TCTGGCCGAA GAGGCCCCAG CTCAGGCCGA CCTGGTGCTG
GGCGTGCCCG ACTCCGGCGT GCCCGGAGCG CTGGGTTTCG CCGAAGCGAG CGGCATCGAA
TACACCGACG GCATCGTCAA GAACCGCTAT GTGGGGCGCA CCTTCATCCA GCCGACCCAG
GAAATGCGCC AGCTGGGCGT GCGCATCAAA CTGAATCCGC TGCCTTCGGT TATTTCCGGC
AAACGCCTGG TGGTGGTCGA CGACAGCATC GTGCGCGGCA CCACTTCCAA AAAGCTGGTG
GAGATGCTGC GCGCCGCCGG AGCCGCCGAA GTGCACCTGC GCATCGTGTC GCCTCCCACC
GCCTGGCCCT GCTTCTACGG CGTTGACACC CCCACCCAGG GTCAGCTCAT TGCGGCGGTC
AAATCCAACC AGGAGATGTG CGAATACATC GGGTGCGATT CGCTGGCGTT CATCAGCATT
GACGGACTGC GGCGCGCCGT TGGCGGTGCA AATCATGAAA CGTTCTGTGA AGCTTGCTTC
ACGGGCGATT ATATTGTTCC CCTGCCAGAA TCACTAACGG ATATAGCGTT TATCAAGAAG
GAGAAGTGA
|
|---|
| Protein sequence | MATSILPGEA PDRPQEECAV FGVFSPTDDV ARLTCFGLQA LQHRGQESAG IAVGDGETVT
VMKDLGLVTQ IFDEGSLAAL QGDVAVGHCR YATSGISDAW FSAQPHMSAI DEVMVALAHN
GTLVDTEPIR ERLEARGVEF RAGTDSEVAC QAIGYYTRET HHLTEGIKQT MELIKGAYAM
VLASPTALYA FRDPNGIRPL CLGKLPGDRG WVVSSETCGL DIVGAEFVRD VNPGEIIRIN
STGISTLQAL EPGPSRGCIF EYVYFARPDS VIDGQSVYQA RRAMGRILAE EAPAQADLVL
GVPDSGVPGA LGFAEASGIE YTDGIVKNRY VGRTFIQPTQ EMRQLGVRIK LNPLPSVISG
KRLVVVDDSI VRGTTSKKLV EMLRAAGAAE VHLRIVSPPT AWPCFYGVDT PTQGQLIAAV
KSNQEMCEYI GCDSLAFISI DGLRRAVGGA NHETFCEACF TGDYIVPLPE SLTDIAFIKK
EK
|
|---|
| |