Gene Shel_00950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00950 
Symbol 
ID8393987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp123549 
End bp124514 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content63% 
IMG OID644984868 
ProductNAD-dependent protein deacetylase, SIR2 family 
Protein accessionYP_003142518 
Protein GI257062846 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0748135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.482885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTT ACGAGCAATT GGTCGTCCAA CTGACCAACC AGTCCTTCAG GTACCAGCAT 
GTCTACCGCC AGGGCGGCAC GCCCTACAGG CTGACCGAGA AGGAGCCGCT GCCTTACGAA
GAGCAAATCA AGGCGTTCGC CCACATGGTC GAGCAGGCCG ACTGCATCCT GGTGGGTGCG
GCATCGGGAC TTTCCGCGGC CGGCGGCGGC GACTTCTATT ACGAAGACAA CGAGTCGTAC
CGCGCCTATT TCGGCAAGTT CGCCGAGAAA TACGGGTTCC AAGGCGCTTT CGCCGGCATG
ATGCACCCGT GGGAAACCGC CGAGGAGCGC TGGGGGTATC TGGCCACGTT TTTGAACACG
ACGCTCAGCG TGCCCGTGCG TCAGCCCTAT GTGGACTTGG ACGCCGTAAT CCGCGACAAG
GAATTCTTCA TCCTGACCAC GAACCAGGAT ACCCAGTTCA TGAAGCTGTA CCCCTGGGAC
AAGGTGGCAG AAATCCAGGG CGATCACCGG TTCTTCCAGT GCCAGCACTG CTGCACCGAC
GAGGTGTGGG ATGCCACCGA ACCCGTGGCG AAGATGATCG AGGGCATGGG CGAGGGCCTG
GCGGTGCCCG CCGACCTGGT GCCGCGTTGC CCCCATTGCG GCGGCGAGGC GTTCCCTTGG
GTGCGCGGCT ACGGCAACTT CCTGCAGGGC GAGCTGTATG ACGAGCAGTA CCGGAAGGTG
TCCGACTGGC TTAGCGAACA TGCCCAGGAG AAGGTGCTGT TCATCGAGCT GGGTGTGGGC
CGCATGACGC CCGCGTTCAT CCAGGAGCCG TTCTGGGCGC TGGTTTCGCA GCTGCCGCAG
GCGAGCTATG TGGGCATCAA CAACGTGACG CAGTTTCTGC CGGAGGTCAT CGAGGACCGT
GGCATCGCCA TCCGCGGCGA CATCGCCGAG GTGCTGACGG ACGTTCGCGC CGAGATGGGA
CGATAA
 
Protein sequence
MTPYEQLVVQ LTNQSFRYQH VYRQGGTPYR LTEKEPLPYE EQIKAFAHMV EQADCILVGA 
ASGLSAAGGG DFYYEDNESY RAYFGKFAEK YGFQGAFAGM MHPWETAEER WGYLATFLNT
TLSVPVRQPY VDLDAVIRDK EFFILTTNQD TQFMKLYPWD KVAEIQGDHR FFQCQHCCTD
EVWDATEPVA KMIEGMGEGL AVPADLVPRC PHCGGEAFPW VRGYGNFLQG ELYDEQYRKV
SDWLSEHAQE KVLFIELGVG RMTPAFIQEP FWALVSQLPQ ASYVGINNVT QFLPEVIEDR
GIAIRGDIAE VLTDVRAEMG R