Gene Shel_00680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00680 
Symbol 
ID8393960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp85104 
End bp86051 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content59% 
IMG OID644984841 
Producthypothetical protein 
Protein accessionYP_003142491 
Protein GI257062819 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA AAACCATTCC CATGGATAGC CAGGACGCTT CGACAGAAAA GCCCGCCGAG 
CTGGAGCAGG TCCTCAACGA CGACATCGCA GCCGCGGAAG ACACGGCCGA GAATGAGGCT
CCCCAGGAAA AGAAGCCTCG CCGATTGGCC GTCAAGGGCG TAGCCATTGC CGCTGCATGC
CTTTTGGCAG GGGGCATCGG CATCGCCGCC AATGTCGCGA ACAGTCCCCA GGAAGCTGGC
AACGCGGCGG AAAGCGCAGC TTCGAAAACC CTGTCCGACG CCGCTTCCGA CGACGCCGAC
AAAACCGGCA AAGTCGACGC GAAGGACACC AAGTCGGACA AGAACGCCAA GGACGACAAG
GCCTCCGACG CCAAGGACGA CAAAGATTCC GACGAAAAGG ATGCCGCCGA CAAGGATAAG
GAAGACACCG TCGGCGCGAA GAAGGACGCT GTCGAATCGA GCGACAAGAA AACCGAAGAC
GCCAAGGCTA GCAGCGACGA TTCCGACCAG GATGATTCTT ACACCCAGAG CAATTCCTCG
AGCAAGAACA GTTCCTCGTC CAGCAGTTCT TCGGCAAGCA GCTCCTCGTC CAGCAGCAGC
TCTTCGTCCA GCAGCTCTTC GACCAGCAGC AAGCCGGCTG AAAAGCAGAA GGTCTGGGTA
GAGCCCGTGT ATCAAGAGGT CTACCACGAA GAAGAGGGCC ATTGGGAAAC GCAGTATGTA
GAGACCGGCC AGGTGGTCTG CAACTGCGGC GCCATATTCG ACTCCGTTGC AGACCAGAAG
GCGCATCAGG ACGCCTACAT CGCGGAGATG CGCCAGATCA ATCCGAATTT CCAATGCACC
GGCGACCACA TGCTGTCCGG GTATTACTCC GAACCGGTTG ATGTCTGGGT GGTGGACTCC
CCCGCCTGGA CCGAGCAGGT CTTGGTCTCC GAGGGCCACT GGGAATAA
 
Protein sequence
MADKTIPMDS QDASTEKPAE LEQVLNDDIA AAEDTAENEA PQEKKPRRLA VKGVAIAAAC 
LLAGGIGIAA NVANSPQEAG NAAESAASKT LSDAASDDAD KTGKVDAKDT KSDKNAKDDK
ASDAKDDKDS DEKDAADKDK EDTVGAKKDA VESSDKKTED AKASSDDSDQ DDSYTQSNSS
SKNSSSSSSS SASSSSSSSS SSSSSSSTSS KPAEKQKVWV EPVYQEVYHE EEGHWETQYV
ETGQVVCNCG AIFDSVADQK AHQDAYIAEM RQINPNFQCT GDHMLSGYYS EPVDVWVVDS
PAWTEQVLVS EGHWE