Gene Shel_00080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_00080 
Symbol 
ID8393900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp9921 
End bp11009 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content67% 
IMG OID644984783 
ProductMULE transposase family protein 
Protein accessionYP_003142433 
Protein GI257062761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0364986 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0762931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACGGA ACGGCAGGAC TGCTGCGGGG ACGCAGCGAT GGCTTTGCAA GTCCTGCAGG 
GCGACCGCGA CGCACAGGAT CGACAACGAC GCAAAGCTGC TCAAGACCTT CCTGGGCTGG
CTGTTCTCAT CCAGGACCCA GGACGAGACG AGGTGGAGCG CCCGCACGTT CAGGCGCAAG
TGCGCGAAGC TCTGGGAAGT CTGGCCGATA CCCCAGCAGA CCGGCGAGGT GCACCGCGCG
GTGTTCGTCG ACGGCCTGCA CATCGCGAAG GGCGTCCACG TCCTCATCGC CAGCACCGAG
GAGCACGTCA TCGGCTGGTA CCTGGCGAGA TCCGAGAACT CCAGGGCGTG GGCCGCGCTC
ATGTCGCCGA TCCCGCCACC GGACGGCGTC GTGACCGACG GCGGCAGCGG GTTCGGGAAG
GCCCGCAAGA AGGTATGGCC CGAAACCAGG GTGCAGCGAT GCGTGTTCCA CGCCTTCAGC
CAGGTCAAGA AGCAGACCAC GACGAGGCCG AAGCTGCAGG CCGGCGTCGA GCTCTACGGG
CTTGCGAAGG AGCTGCTGCA CGCCAAGACG CCCTCGGCGG CGACCGCGTG GCTGCAGGCG
TCCAACGACT GGTGCGAGCG CTGGGAGGAC TTCCTGGCGG AGAGGACCCC GAACGAGGAG
ACGGGCAAGC GGGATTGGAC GCACGAGCGC CTCGTCACCG CCAGGAACGG CCTGAACGCG
CTGATCAGGC GCGGCCGCCT CTTCACGTTC CTCGACCCGG AGTTGACTGC GGAGGGCCCC
GTGCCGAGCA CCAACAACAG GCACGAGGGA GGCGTCAACG CCCCTCTGCG CGACATGCTG
AGGCTGCACC GCGGCATGAG CACCCTGCGC CGCGTCAAGG CGGTGTTCTG GTGGTGCTGC
ATGCACTCGG ATAACCCCCT CCCGGCGGCG GAGATTCTGG CCGCGATGCC GACCGACGAG
GACATTGCCG CCCTCTGCAG GAGGATTGTT TACGAGCCGC AGAAGCGGGA CGGCCCGGTT
GAGTGGGGCG ACGGACTGGT GTGGGCCGAA TTACACCACT CGACGCCTTG GCGCATCGAT
TGGGATTGA
 
Protein sequence
MVRNGRTAAG TQRWLCKSCR ATATHRIDND AKLLKTFLGW LFSSRTQDET RWSARTFRRK 
CAKLWEVWPI PQQTGEVHRA VFVDGLHIAK GVHVLIASTE EHVIGWYLAR SENSRAWAAL
MSPIPPPDGV VTDGGSGFGK ARKKVWPETR VQRCVFHAFS QVKKQTTTRP KLQAGVELYG
LAKELLHAKT PSAATAWLQA SNDWCERWED FLAERTPNEE TGKRDWTHER LVTARNGLNA
LIRRGRLFTF LDPELTAEGP VPSTNNRHEG GVNAPLRDML RLHRGMSTLR RVKAVFWWCC
MHSDNPLPAA EILAAMPTDE DIAALCRRIV YEPQKRDGPV EWGDGLVWAE LHHSTPWRID
WD